Literature DB >> 6497848

The evolution of enzyme kinetic power.

T Keleti, G R Welch.   

Abstract

Evolution of the kinetic potential of enzyme reactions is discussed. Quantitative assessment of the evolution of enzyme action has usually focused on optimization of the parametric ratio kcat./Km, which is the apparent second-order rate constant for the reaction of free substrate with free enzyme to give product. We propose that the general form kcat.[E]T/Km (where [E]T is total enzyme concentration), which is designated the 'kinetic power', is the real measure of kinetic/catalytic potential in situ. The standard paradigm of 'perfection' dictates the evolutionary maximum of 'kinetic power' to be k+s[E]T/2, where k+s is the diffusion-controlled rate constant for formation of the ES complex (and, hence, for the overall enzyme reaction). We discuss the role of protein conformational mobility in determining this state of 'perfection', via gating of substrate binding and determination of the catalytic configuration. Going beyond the level of the individual enzyme, we indicate the manner by which the organizational features of enzyme action in vivo may enhance the 'kinetic power'. Through evolutionary 'perfection' of the microenvironment, one finds that the 'kinetic power' of enzymes can be affected by alteration of [E]T as well as the unitary rate constants. At this level of complexity, we begin to realize that the 'kinetic' description of cell metabolism must be supplemented with thermodynamic concepts.

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Year:  1984        PMID: 6497848      PMCID: PMC1144300          DOI: 10.1042/bj2230299

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  20 in total

Review 1.  Statistical time events in enzymes: a physical assessment.

Authors:  G Careri; P Fasella; E Gratton
Journal:  CRC Crit Rev Biochem       Date:  1975-08

Review 2.  On the role of organized multienzyme systems in cellular metabolism: a general synthesis.

Authors:  G R Welch
Journal:  Prog Biophys Mol Biol       Date:  1977       Impact factor: 3.667

3.  Role of flexibility in the specificity, control and evolutiion of enzymes.

Authors:  D E Koshland
Journal:  FEBS Lett       Date:  1976-02-04       Impact factor: 4.124

4.  Whither enzyme mechanisms?

Authors:  J R Knowles
Journal:  FEBS Lett       Date:  1976-02-04       Impact factor: 4.124

5.  The effect of natural selection on enzymic catalysis.

Authors:  A Cornish-Bowden
Journal:  J Mol Biol       Date:  1976-02-15       Impact factor: 5.469

6.  Evolution of enzyme catalytic power. Characteristics of optimal catalysis evaluated for the simplest plausible kinetic model.

Authors:  K Brocklehurst
Journal:  Biochem J       Date:  1977-04-01       Impact factor: 3.857

7.  Dynamic compartmentation in soluble enzyme systems.

Authors:  P Friedrich
Journal:  Acta Biochim Biophys Acad Sci Hung       Date:  1974

8.  A theoretical model for calculation of the rate constant of enzyme-substrate complex formation. I. Calculation of rate constant in the case of motionless enzyme molecule without nonspecific intermolecular forces.

Authors:  B Somogyi; S Damjanovich
Journal:  Acta Biochim Biophys Acad Sci Hung       Date:  1973

9.  Effect of steric changes in the protein on the kinetics of enzymic reactions. II. Steady-state treatment of reactions with one substrate.

Authors:  T Keleti
Journal:  Acta Biochim Biophys Acad Sci Hung       Date:  1968

10.  The pre-eminence of k(cat) in the manifestation of optimal enzymic activity delineated by using the Briggs-Haldane two-step irreversible kinetic model.

Authors:  K Brocklehurst; A Cornish-Bowden
Journal:  Biochem J       Date:  1976-10-01       Impact factor: 3.857

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  7 in total

1.  Testing and characterizing enzymes and membrane-bound carrier proteins acting on amphipathic ligands in the presence of bilayer membrane material and soluble binding protein. Application to the uptake of oleate into isolated cells.

Authors:  K P Heirwegh; J A Meuwissen
Journal:  Biochem J       Date:  1992-06-01       Impact factor: 3.857

Review 2.  Energy coupling and Hill cycles in enzymatic processes.

Authors:  F Kamp; G R Welch; H V Westerhoff
Journal:  Cell Biophys       Date:  1988 Jan-Jun

3.  Transient-time analysis of substrate-channelling in interacting enzyme systems.

Authors:  J Ovádi; P Tompa; B Vértessy; F Orosz; T Keleti; G R Welch
Journal:  Biochem J       Date:  1989-01-01       Impact factor: 3.857

4.  Relative rates of transport of peptidyl drugs by Candida albicans.

Authors:  P J McCarthy; D J Newman; L J Nisbet; W D Kingsbury
Journal:  Antimicrob Agents Chemother       Date:  1985-10       Impact factor: 5.191

5.  Aerobic excretion of 1,2-propanediol by Salmonella typhimurium.

Authors:  L Baldoma; J Badia; N Obradors; J Aguilar
Journal:  J Bacteriol       Date:  1988-06       Impact factor: 3.490

6.  Metabolism of L-fucose and L-rhamnose in Escherichia coli: aerobic-anaerobic regulation of L-lactaldehyde dissimilation.

Authors:  L Baldomà; J Aguilar
Journal:  J Bacteriol       Date:  1988-01       Impact factor: 3.490

7.  Towards a matrix mechanics framework for dynamic protein network.

Authors:  Sanjoy K Bhattacharya
Journal:  Syst Synth Biol       Date:  2010-01-09
  7 in total

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