Literature DB >> 6469978

Mechanism of the glycine cleavage reaction. Further characterization of the intermediate attached to H-protein and of the reaction catalyzed by T-protein.

K Fujiwara, K Okamura-Ikeda, Y Motokawa.   

Abstract

Glycine is converted to carbon dioxide and an intermediate attached to H-protein in the P-protein-catalyzed partial reaction of the glycine cleavage reaction (Fujiwara, K., and Motokawa, Y. (1983) J. Biol. Chem. 258, 8156-8162). The studies presented in this communication indicate that the amino group of glycine is retained in the intermediate and released as ammonia in the second partial reaction catalyzed by T-protein. The formation of ammonia accompanies the stoichiometric formation of 5,10-methylenetetrahydrofolate from the methylene carbon of glycine and tetrahydrofolate. Kinetic studies show that the reaction proceeds through a sequential mechanism. Km values for the intermediate complex and tetrahydrofolate are 2.2 and 50 microM, respectively. In the absence of tetrahydrofolate, T-protein catalyzes the stoichiometric formation of ammonia and formaldehyde from the intermediate although the velocity is extremely low. Km value for the intermediate complex in the absence of tetrahydrofolate is 10.3 microM, about 4-fold higher than the value in the presence of tetrahydrofolate. The addition of tetrahydrofolate increased the rate about 2400-fold. The modification of the free lipoyl sulfhydryl group with N-ethylmaleimide caused the intermediate complex inactive. The lipoyl sulfhydryl group seems to be essential for both P-protein- and T-protein-catalyzed partial reactions.

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Year:  1984        PMID: 6469978

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  11 in total

1.  New RNA motifs suggest an expanded scope for riboswitches in bacterial genetic control.

Authors:  Jeffrey E Barrick; Keith A Corbino; Wade C Winkler; Ali Nahvi; Maumita Mandal; Jennifer Collins; Mark Lee; Adam Roth; Narasimhan Sudarsan; Inbal Jona; J Kenneth Wickiser; Ronald R Breaker
Journal:  Proc Natl Acad Sci U S A       Date:  2004-04-19       Impact factor: 11.205

2.  An energetically beneficial leader-linker interaction abolishes ligand-binding cooperativity in glycine riboswitches.

Authors:  Eileen M Sherman; Jackie Esquiaqui; Galal Elsayed; Jing-Dong Ye
Journal:  RNA       Date:  2012-01-25       Impact factor: 4.942

3.  Isolation of H-protein loaded with methylamine as a transient species in glycine decarboxylase reactions.

Authors:  M Neuburger; A Jourdain; R Douce
Journal:  Biochem J       Date:  1991-09-15       Impact factor: 3.857

4.  T-protein of the glycine decarboxylase multienzyme complex: evidence for partial similarity to formyltetrahydrofolate synthetase.

Authors:  S Kopriva; S R Turner; S Rawsthorne; H Bauwe
Journal:  Plant Mol Biol       Date:  1995-03       Impact factor: 4.076

5.  T-protein of glycine decarboxylase from Solanum tuberosum.

Authors:  S Kopriva; H Bauwe
Journal:  Plant Physiol       Date:  1994-03       Impact factor: 8.340

6.  Crystal structure of aminomethyltransferase in complex with dihydrolipoyl-H-protein of the glycine cleavage system: implications for recognition of lipoyl protein substrate, disease-related mutations, and reaction mechanism.

Authors:  Kazuko Okamura-Ikeda; Harumi Hosaka; Nobuo Maita; Kazuko Fujiwara; Akiyasu C Yoshizawa; Atsushi Nakagawa; Hisaaki Taniguchi
Journal:  J Biol Chem       Date:  2010-04-06       Impact factor: 5.157

7.  DNA-rescuable allosteric inhibition of aptamer II ligand affinity by aptamer I element in the shortened Vibrio cholerae glycine riboswitch.

Authors:  Eileen M Sherman; Galal Elsayed; Jackie M Esquiaqui; Mohammed Elsayed; Bryan Brinda; Jing-Dong Ye
Journal:  J Biochem       Date:  2014-08-04       Impact factor: 3.387

8.  Channelling and formation of 'active' formaldehyde in dimethylglycine oxidase.

Authors:  David Leys; Jaswir Basran; Nigel S Scrutton
Journal:  EMBO J       Date:  2003-08-15       Impact factor: 11.598

9.  Purification and partial characterization of the glycine decarboxylase multienzyme complex from Eubacterium acidaminophilum.

Authors:  W Freudenberg; J R Andreesen
Journal:  J Bacteriol       Date:  1989-04       Impact factor: 3.490

10.  Assimilation of formic acid and CO2 by engineered Escherichia coli equipped with reconstructed one-carbon assimilation pathways.

Authors:  Junho Bang; Sang Yup Lee
Journal:  Proc Natl Acad Sci U S A       Date:  2018-09-17       Impact factor: 11.205

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