Literature DB >> 6450614

Productive and abortive initiation of transcription in vitro at the lac UV5 promoter.

J D Gralla, A J Carpousis, J E Stefano.   

Abstract

The rates of productive and abortive initiation of transcription in vitro at the lac UV5 promoter have been determined and compared to values determined for phage lambda and T7 promoters. The rate constants for productive initiation of lac transcript are consistently lower over a range of low to moderate concentration of initiating nucleoside triphosphate (ATP). Abortive initiation of lac dinucleoside tetraphosphate is also slower at low to moderate concentrations of ATP. These data demonstrate the existence of significant differences in initiation rate among promoters. We suggest that these differences may be a consequence of the initial mRNA sequences and extents of RNA polymerase cycling during initiation of promoter-specific transcription.

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Year:  1980        PMID: 6450614     DOI: 10.1021/bi00566a031

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  25 in total

1.  Translocation after synthesis of a four-nucleotide RNA commits RNA polymerase II to promoter escape.

Authors:  Jennifer F Kugel; James A Goodrich
Journal:  Mol Cell Biol       Date:  2002-02       Impact factor: 4.272

2.  Fluorescence-based assay to measure the real-time kinetics of nucleotide incorporation during transcription elongation.

Authors:  Guo-Qing Tang; Vasanti S Anand; Smita S Patel
Journal:  J Mol Biol       Date:  2010-10-28       Impact factor: 5.469

3.  Manipulating archaeal systems to permit analyses of transcription elongation-termination decisions in vitro.

Authors:  Alexandra M Gehring; Thomas J Santangelo
Journal:  Methods Mol Biol       Date:  2015

4.  Insights into the mechanism of initial transcription in Escherichia coli RNA polymerase.

Authors:  Satamita Samanta; Craig T Martin
Journal:  J Biol Chem       Date:  2013-09-18       Impact factor: 5.157

Review 5.  Single-molecule studies of RNA polymerase: motoring along.

Authors:  Kristina M Herbert; William J Greenleaf; Steven M Block
Journal:  Annu Rev Biochem       Date:  2008       Impact factor: 23.643

Review 6.  RNA polymerase-promoter interactions: the comings and goings of RNA polymerase.

Authors:  P L deHaseth; M L Zupancic; M T Record
Journal:  J Bacteriol       Date:  1998-06       Impact factor: 3.490

7.  Mechanism of transcription initiation and promoter escape by E. coli RNA polymerase.

Authors:  Kate L Henderson; Lindsey C Felth; Cristen M Molzahn; Irina Shkel; Si Wang; Munish Chhabra; Emily F Ruff; Lauren Bieter; Joseph E Kraft; M Thomas Record
Journal:  Proc Natl Acad Sci U S A       Date:  2017-03-27       Impact factor: 11.205

8.  Effect of salts on abortive and productive elongation catalysed by wheat germ RNA polymerase II.

Authors:  J Dietrich; M Teissere; C Job; D Job
Journal:  Nucleic Acids Res       Date:  1986-02-25       Impact factor: 16.971

9.  Poly(dAT) dependent trinucleotide synthesis catalysed by wheat germ RNA polymerase II. Effects of nucleotide substrates and cordycepin triphosphate.

Authors:  J Dietrich; M Teissere; C Job; D Job
Journal:  Nucleic Acids Res       Date:  1985-09-11       Impact factor: 16.971

10.  Mathematical modeling of translation initiation for the estimation of its efficiency to computationally design mRNA sequences with desired expression levels in prokaryotes.

Authors:  Dokyun Na; Sunjae Lee; Doheon Lee
Journal:  BMC Syst Biol       Date:  2010-05-26
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