Literature DB >> 6430186

Structure, refinement, and function of carbonic anhydrase isozymes: refinement of human carbonic anhydrase I.

K K Kannan, M Ramanadham, T A Jones.   

Abstract

The structure of human erythrocyte carbonic anhydrase I has been refined to a final R value of 19% to 2-A resolution by a combination of least squares refinement and model fitting in a three-dimensional graphics display. About 300 solvent atoms have been located bound to the protein molecule. An interesting hydrogen bond network involving Zn2+, the liganded solvent, side chain groups of Thr-199, Glu-106, Thr-7, and His-64 through two solvent molecules have been found that may be important for the catalytic mechanism of the carbonic anhydrase.

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Year:  1984        PMID: 6430186     DOI: 10.1111/j.1749-6632.1984.tb12314.x

Source DB:  PubMed          Journal:  Ann N Y Acad Sci        ISSN: 0077-8923            Impact factor:   5.691


  22 in total

1.  Structural analysis of charge discrimination in the binding of inhibitors to human carbonic anhydrases I and II.

Authors:  D K Srivastava; Kevin M Jude; Abir L Banerjee; Manas Haldar; Sumathra Manokaran; Joel Kooren; Sanku Mallik; David W Christianson
Journal:  J Am Chem Soc       Date:  2007-04-04       Impact factor: 15.419

2.  Characterization of heterologously produced carbonic anhydrase from Methanosarcina thermophila.

Authors:  B E Alber; J G Ferry
Journal:  J Bacteriol       Date:  1996-06       Impact factor: 3.490

Review 3.  Proton solvation and transport in aqueous and biomolecular systems: insights from computer simulations.

Authors:  Jessica M J Swanson; C Mark Maupin; Hanning Chen; Matt K Petersen; Jiancong Xu; Yujie Wu; Gregory A Voth
Journal:  J Phys Chem B       Date:  2007-04-13       Impact factor: 2.991

Review 4.  Carbonic anhydrase as a model for biophysical and physical-organic studies of proteins and protein-ligand binding.

Authors:  Vijay M Krishnamurthy; George K Kaufman; Adam R Urbach; Irina Gitlin; Katherine L Gudiksen; Douglas B Weibel; George M Whitesides
Journal:  Chem Rev       Date:  2008-03       Impact factor: 60.622

5.  Differences in the amino acid distributions of 3(10)-helices and alpha-helices.

Authors:  M E Karpen; P L de Haseth; K E Neet
Journal:  Protein Sci       Date:  1992-10       Impact factor: 6.725

6.  Stabilization of anionic and neutral forms of a fluorophoric ligand at the active site of human carbonic anhydrase I.

Authors:  Sumathra Manokaran; Jayati Banerjee; Sanku Mallik; D K Srivastava
Journal:  Biochim Biophys Acta       Date:  2010-07-08

7.  Crystal structure of the dimeric extracellular domain of human carbonic anhydrase XII, a bitopic membrane protein overexpressed in certain cancer tumor cells.

Authors:  D A Whittington; A Waheed; B Ulmasov; G N Shah; J H Grubb; W S Sly; D W Christianson
Journal:  Proc Natl Acad Sci U S A       Date:  2001-08-07       Impact factor: 11.205

8.  Cryptophane xenon-129 nuclear magnetic resonance biosensors targeting human carbonic anhydrase.

Authors:  Jennifer M Chambers; P Aru Hill; Julie A Aaron; Zhaohui Han; David W Christianson; Nicholas N Kuzma; Ivan J Dmochowski
Journal:  J Am Chem Soc       Date:  2009-01-21       Impact factor: 15.419

9.  Origins of enhanced proton transport in the Y7F mutant of human carbonic anhydrase II.

Authors:  C Mark Maupin; Marissa G Saunders; Ian F Thorpe; Robert McKenna; David N Silverman; Gregory A Voth
Journal:  J Am Chem Soc       Date:  2008-07-31       Impact factor: 15.419

10.  Apo and nickel-bound forms of the Pyrococcus horikoshii species of the metalloregulatory protein: NikR characterized by molecular dynamics simulations.

Authors:  Daniel J Sindhikara; Adrian E Roitberg; Kenneth M Merz
Journal:  Biochemistry       Date:  2009-12-22       Impact factor: 3.162

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