Literature DB >> 6414465

Competitive inhibition of the inverting beta-xylosidase of Bacillus pumilus 12 by monosaccharide derivatives of different structural and conformational types. A possible natural substrate.

P J Marshall, M L Sinnott.   

Abstract

The title enzyme is competitively inhibited by compounds, for example alpha-D-xylopyranosylpyridinium salts and 1,6-anhydro-D-glucopyranose, for which the normal 4C1 conformation of the xylopyranose ring is precluded. It is competitively inhibited by compounds, for example beta-D-xylopyranosylpyridinium salts and 1,6-anhydro-L-idopyranose, for which the 1C4 conformation is precluded, and which have no accessible conformations in common with the first set of inhibitors. It is also competitively inhibited by alpha-L-arabinofuranosides. Inhibition by 1,6-anhydroglucopyranose, 1,6-anhydro-L-idopyranose and L-arabinono-gamma-lactone is competitive with respect to each other. alpha-D-Xylopyranosyl fluoride is not a detectable substrate, by itself or in the presence of a representative of any of the three types of inhibitor. On the basis of these and literature data, it is proposed that the natural substrate is a hemicellulose fragment containing the D-Xylp beta (1 leads to 4)-[L-Araf alpha (1 leads to 3)]D-Xylp structure. Tentative inferences about the catalytic mechanism can also be drawn.

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Year:  1983        PMID: 6414465      PMCID: PMC1152364          DOI: 10.1042/bj2150067

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  25 in total

Review 1.  Binding energy, specificity, and enzymic catalysis: the circe effect.

Authors:  W P Jencks
Journal:  Adv Enzymol Relat Areas Mol Biol       Date:  1975

2.  Photo-affinity labeling of beta-D-xylosidase.

Authors:  E Saman; M Claeyssens; H Kersters-Hilderson; C De Bruyne
Journal:  FEBS Lett       Date:  1976-03-15       Impact factor: 4.124

3.  Mechanism of action of beta-D-xylosidase from Bacillus pumilus PRL B12: pH- and alpha-deuterium kinetic isotope effects [proceedings].

Authors:  E Van Doorslaer; H Kersters-Hilderson; C K De Bruyne
Journal:  Arch Int Physiol Biochim       Date:  1979-10

Review 4.  Active site directed inhibitors and mechanism of action of glycosidases.

Authors:  G Legler
Journal:  Mol Cell Biochem       Date:  1973-11-15       Impact factor: 3.396

5.  A possible mechanism for amylase catalysis.

Authors:  J A Thoma
Journal:  J Theor Biol       Date:  1968-06       Impact factor: 2.691

Review 6.  Extracellular enzymes in soil.

Authors:  J Skujiņs
Journal:  CRC Crit Rev Microbiol       Date:  1976-05

7.  Active site-directed inhibition of galactosidases by conduritol C epoxides (1,2-anhydro-epi- and neo-inositol).

Authors:  G Legler; M Herrchen
Journal:  FEBS Lett       Date:  1981-11-30       Impact factor: 4.124

8.  Binding of 4-methylumbelliferyl-beta-D-ribopyranoside to beta-D-xylosidase from Bacillus pumilus.

Authors:  M Claeyssens; C K De Bruyne
Journal:  Biochim Biophys Acta       Date:  1978-03-28

9.  Binding of n-alkyl beta-D-xylopyranosides and n-alkyl 1-thio-beta-D-xylopyranosides to beta-D-xylosidase from Bacillus pumilus PRL B12.

Authors:  H Kersters-Hilderson; E Van Doorslaer; C K De Bruyne
Journal:  Carbohydr Res       Date:  1980-01-01       Impact factor: 2.104

10.  Stereospecific ring opening of conduritol-B-epoxide by an active site asparatate residue of sucrase-isomaltase.

Authors:  H Braun; G Legler; J Deshusses; G Semenza
Journal:  Biochim Biophys Acta       Date:  1977-07-08
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  1 in total

1.  Structural basis of product inhibition by arabinose and xylose of the thermostable GH43 β-1,4-xylosidase from Geobacillus thermoleovorans IT-08.

Authors:  Ali Rohman; Niels van Oosterwijk; Ni Nyoman Tri Puspaningsih; Bauke W Dijkstra
Journal:  PLoS One       Date:  2018-04-26       Impact factor: 3.240

  1 in total

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