Literature DB >> 6400880

Poly(dA-dT).poly(dA-dT) in low salt appears to be a left-handed B-helix combined use of chemical theory, fiber diffraction and NMR spectroscopy.

G Gupta1, M H Sarma, M M Dhingra, R H Sarma, M Rajagopalan, V Sasisekharan.   

Abstract

Poly(dA-dT).poly(dA-dT) can adopt the B- and D- forms in the fibrous state. Theoretical energy calculations and fiber diffraction analyses suggest that there can be three structural models of poly(dA-dT).poly(dA-dT) in each of these two forms viz right and left-handed Watson Crick models and left-handed Hoogsteen--a total of six possible models. Fiber data for the polymer in the B- or the D-form or energy calculations cannot distinguish any one model from the other. However, a comparison of observed proton chemical shifts with the theoretically computed ones and the NOE studies on exchangeable and nonexchangeable protons suggest that poly(dA-dT).poly(dA-dT) in low salt solution exists predominantly in the left-handed B-conformation.

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Year:  1983        PMID: 6400880     DOI: 10.1080/07391102.1983.10507450

Source DB:  PubMed          Journal:  J Biomol Struct Dyn        ISSN: 0739-1102


  2 in total

1.  Molecular basis for sequence-dependent induced DNA bending.

Authors:  Michael Rettig; Markus W Germann; Shuo Wang; W David Wilson
Journal:  Chembiochem       Date:  2013-01-25       Impact factor: 3.164

2.  The poly dA strand of poly dA.poly dT adopts an A-form in solution: a UV resonance Raman study.

Authors:  B Jollès; A Laigle; L Chinsky; P Y Turpin
Journal:  Nucleic Acids Res       Date:  1985-03-25       Impact factor: 16.971

  2 in total

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