Literature DB >> 6369251

Enzymatic conversion of adenosine to inosine in the wobble position of yeast tRNAAsp: the dependence on the anticodon sequence.

E Haumont, M Fournier, S de Henau, H Grosjean.   

Abstract

We have investigated the specificity of the tRNA modifying enzyme that transforms the adenosine at position 34 (wobble position) into inosine in the anticodon of several tRNAs. For this purpose, we have constructed sixteen recombinants of yeast tRNAAsp harboring an AXY anticodon (where X or Y was one of the four nucleotides A, G, C or U). This was done by enzymatic manipulations in vitro of the yeast tRNAAsp, involving specific hydrolysis with S1-nuclease and RNAase A, phosphorylation with T4-polynucleotide kinase and ligation with T4-RNA ligase: it allowed us to replace the normal anticodon GUC by trinucleotides AXY and to introduce simultaneously a 32P-labelled phosphate group between the uridine at position 33 and the newly inserted adenosine at position 34. Each of these 32P-labelled AXY "anticodon-substituted" yeast tRNAAsp were microinjected into the cytoplasm of Xenopus laevis oocytes and assayed for their capacity to act as substrates for the A34 to I34 transforming enzyme. Our results indicate that: 1/ A34 in yeast tRNAAsp harboring the arginine anticodon ACG or an AXY anticodon with a purine at position 35 but with A, G or C but not U at position 36 were efficiently modified into I34; 2/ all yeast tRNAAsp harboring an AXY anticodon with a pyrimidine at position 35 (except ACG) or uridine at position 36 were not modified at all. This demonstrates a strong dependence on the anticodon sequence for the A34 to I34 transformation in yeast tRNAAsp by the putative cytoplasmic adenosine deaminase of Xenopus laevis oocytes.

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Year:  1984        PMID: 6369251      PMCID: PMC318700          DOI: 10.1093/nar/12.6.2705

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  18 in total

1.  Aminoacylation of transfer RNA microinjected into Xenopus laevis oocytes.

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Journal:  Nature       Date:  1975-08-21       Impact factor: 49.962

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Authors:  V Cameron; O C Uhlenbeck
Journal:  Biochemistry       Date:  1977-11-15       Impact factor: 3.162

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Authors:  T H Jukes
Journal:  Science       Date:  1977-10-21       Impact factor: 47.728

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Journal:  Can J Biochem       Date:  1974-05

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Authors:  M P Deutscher
Journal:  Methods Enzymol       Date:  1974       Impact factor: 1.600

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Authors:  H O Kammen; S J Spengler
Journal:  Biochim Biophys Acta       Date:  1970-08-08

7.  RNA processing in microinjected Xenopus oocytes. Sequential addition of base modifications in the spliced transfer RNA.

Authors:  K Nishikura; E M De Robertis
Journal:  J Mol Biol       Date:  1981-01-15       Impact factor: 5.469

8.  Intracellular transport of microinjected 5S and small nuclear RNAs.

Authors:  E M De Robertis; S Lienhard; R F Parisot
Journal:  Nature       Date:  1982-02-18       Impact factor: 49.962

9.  Codon--anticodon pairing: the wobble hypothesis.

Authors:  F H Crick
Journal:  J Mol Biol       Date:  1966-08       Impact factor: 5.469

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Authors:  M Sprinzl; T Wagner; S Lorenz; V A Erdmann
Journal:  Biochemistry       Date:  1976-07-13       Impact factor: 3.162

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  17 in total

1.  In vitro construction of yeast tRNAAsp variants: nucleotide substitutions and additions in T-stem and T-loop.

Authors:  P Carbon; J P Ebel
Journal:  Nucleic Acids Res       Date:  1987-03-11       Impact factor: 16.971

2.  Pleiotrophic effects of point mutations in yeast tRNA(Asp) on the base modification pattern.

Authors:  J Edqvist; K B Stråby; H Grosjean
Journal:  Nucleic Acids Res       Date:  1993-02-11       Impact factor: 16.971

3.  Widespread inosine-containing mRNA in lymphocytes regulated by ADAR1 in response to inflammation.

Authors:  Jing-Hua Yang; Xiaoxing Luo; Yongzhan Nie; Yingjun Su; Qingchuan Zhao; Koroush Kabir; Dexin Zhang; Reuven Rabinovici
Journal:  Immunology       Date:  2003-05       Impact factor: 7.397

4.  Structural requirements for enzymatic formation of threonylcarbamoyladenosine (t6A) in tRNA: an in vivo study with Xenopus laevis oocytes.

Authors:  A Morin; S Auxilien; B Senger; R Tewari; H Grosjean
Journal:  RNA       Date:  1998-01       Impact factor: 4.942

5.  Replacement and insertion of nucleotides at the anticodon loop of E. coli tRNAMetf by ligation of chemically synthesized ribooligonucleotides.

Authors:  T Doi; A Yamane; J Matsugi; E Ohtsuka; M Ikehara
Journal:  Nucleic Acids Res       Date:  1985-05-24       Impact factor: 16.971

6.  A transfer RNAArg gene of Pelargonium chloroplasts, but not a 5S RNA gene, is efficiently transcribed after injection into Xenopus oocyte nuclei.

Authors:  D Hellmund; M Metzlaff; E Serfling
Journal:  Nucleic Acids Res       Date:  1984-11-12       Impact factor: 16.971

7.  Sequence and structure requirements for the biosynthesis of pseudouridine (psi 35) in plant pre-tRNA(Tyr).

Authors:  Z Szweykowska-Kulinska; H Beier
Journal:  EMBO J       Date:  1992-05       Impact factor: 11.598

8.  Identity determinants of human tRNA(Ser): sequence elements necessary for serylation and maturation of a tRNA with a long extra arm.

Authors:  T Achsel; H J Gross
Journal:  EMBO J       Date:  1993-08       Impact factor: 11.598

9.  Enzymatic 2'-O-methylation of the wobble nucleoside of eukaryotic tRNAPhe: specificity depends on structural elements outside the anticodon loop.

Authors:  L Droogmans; E Haumont; S de Henau; H Grosjean
Journal:  EMBO J       Date:  1986-05       Impact factor: 11.598

10.  Enzymatic conversion of guanosine 3' adjacent to the anticodon of yeast tRNAPhe to N1-methylguanosine and the wye nucleoside: dependence on the anticodon sequence.

Authors:  L Droogmans; H Grosjean
Journal:  EMBO J       Date:  1987-02       Impact factor: 11.598

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