Literature DB >> 6330033

Evidence for antitermination in Escherichia coli RRNA transcription.

S Aksoy, C L Squires, C Squires.   

Abstract

The stable RNA operons of Escherichia coli do not exhibit polarity, even though they make an RNA product that is not translated. By contrast, most E. coli operons that specify proteins exhibit polarity if their translation is interrupted. The transcriptional component of this polarity depends on the action of Rho protein on the exposed mRNA, which results in premature transcription termination. Here we examine how a stable RNA operon (rrnG) transcript is protected from the Rho protein-mediated polarity response. We compared transcription from the ara and the rrnG promoters through a 16S DNA segment. In each case, the promoter-16S sequences were joined to a trp-lac fusion, and lacZ mRNA was examined in rho+ and rho-115 strains. We found significant Rho protein-dependent termination of transcripts from the ara promoter but little or no Rho protein effect on transcription from the rrnG promoter. We concluded that the transcript of the 16S ribosomal DNA segment does contain Rho protein-dependent transcription terminators, but there is an antitermination system in the rrnG control region that allows it to transcribe through those terminators.

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Year:  1984        PMID: 6330033      PMCID: PMC215622          DOI: 10.1128/jb.159.1.260-264.1984

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  33 in total

1.  Control features within the rplJL-rpoBC transcription unit of Escherichia coli.

Authors:  G Barry; C L Squires; C Squires
Journal:  Proc Natl Acad Sci U S A       Date:  1979-10       Impact factor: 11.205

2.  Polar mutations in lac, gal and phage lambda consist of a few IS-DNA sequences inserted with either orientation.

Authors:  M Fiandt; W Szybalski; M H Malamy
Journal:  Mol Gen Genet       Date:  1972

3.  Electron microscope heteroduplex studies of sequence relations among plasmids of Escherichia coli. VIII. The structure of bacteriophage phi 80d-3ilv+su+7, including the mapping of the ribosomal RNA genes.

Authors:  E Otsubo; L Soll; R C Deonier; H J Lee; N Davidson
Journal:  J Mol Biol       Date:  1974-11-15       Impact factor: 5.469

4.  Insertions of Tn 10 into an E. coli ribosomal RNA operon are incompletely polar.

Authors:  E A Morgan
Journal:  Cell       Date:  1980-08       Impact factor: 41.582

5.  A colony bank containing synthetic Col El hybrid plasmids representative of the entire E. coli genome.

Authors:  L Clarke; J Carbon
Journal:  Cell       Date:  1976-09       Impact factor: 41.582

6.  RPC-5 column chromatography for the isolation of DNA fragments.

Authors:  R D Wells; S C Hardies; G T Horn; B Klein; J E Larson; S K Neuendorf; N Panayotatos; R K Patient; E Selsing
Journal:  Methods Enzymol       Date:  1980       Impact factor: 1.600

7.  Analysis of gene control signals by DNA fusion and cloning in Escherichia coli.

Authors:  M J Casadaban; S N Cohen
Journal:  J Mol Biol       Date:  1980-04       Impact factor: 5.469

8.  Rifampicin supersensitivity of rho strains of E. coli, and suppression by sur mutation.

Authors:  S K Guterman; C L Howitt
Journal:  Mol Gen Genet       Date:  1979-01-16

9.  Induction of sigma factor synthesis in Escherichia coli by the N gene product of bacteriophage lambda.

Authors:  Y Nakamura; T Yura
Journal:  Proc Natl Acad Sci U S A       Date:  1976-12       Impact factor: 11.205

10.  Translational coupling during expression of the tryptophan operon of Escherichia coli.

Authors:  D S Oppenheim; C Yanofsky
Journal:  Genetics       Date:  1980-08       Impact factor: 4.562

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  35 in total

1.  Increased rrn gene dosage causes intermittent transcription of rRNA in Escherichia coli.

Authors:  J Voulgaris; S French; R L Gourse; C Squires; C L Squires
Journal:  J Bacteriol       Date:  1999-07       Impact factor: 3.490

2.  Ribosomal protein S4 is a transcription factor with properties remarkably similar to NusA, a protein involved in both non-ribosomal and ribosomal RNA antitermination.

Authors:  M Torres; C Condon; J M Balada; C Squires; C L Squires
Journal:  EMBO J       Date:  2001-07-16       Impact factor: 11.598

3.  rRNA antitermination functions with heat shock promoters.

Authors:  Hyuk Kyu Seoh; Michelle Weech; Ning Zhang; Catherine L Squires
Journal:  J Bacteriol       Date:  2003-11       Impact factor: 3.490

4.  Premature termination of in vivo transcription of a gene encoding a branched-chain amino acid transport protein in Escherichia coli.

Authors:  R M Williamson; D L Oxender
Journal:  J Bacteriol       Date:  1992-03       Impact factor: 3.490

5.  In vivo effect of NusB and NusG on rRNA transcription antitermination.

Authors:  Martha Torres; Joan-Miquel Balada; Malcolm Zellars; Craig Squires; Catherine L Squires
Journal:  J Bacteriol       Date:  2004-03       Impact factor: 3.490

6.  Physiological effects of the fructose-1,6-diphosphate aldolase ts8 mutation on stable RNA synthesis in Escherichia coli.

Authors:  M Singer; W A Walter; B M Cali; P Rouviere; H H Liebke; R L Gourse; C A Gross
Journal:  J Bacteriol       Date:  1991-10       Impact factor: 3.490

7.  Suppression of the abnormal phenotype of Salmonella typhimurium rfaH mutants by mutations in the gene for transcription termination factor Rho.

Authors:  A Farewell; R Brazas; E Davie; J Mason; L I Rothfield
Journal:  J Bacteriol       Date:  1991-08       Impact factor: 3.490

8.  Stochasticity and traffic jams in the transcription of ribosomal RNA: Intriguing role of termination and antitermination.

Authors:  Stefan Klumpp; Terence Hwa
Journal:  Proc Natl Acad Sci U S A       Date:  2008-11-18       Impact factor: 11.205

9.  The sequence of the distal end of the E. coli ribosomal RNA rrnE operon indicates conserved features are shared by rrn operons.

Authors:  H Liebke; G Hatfull
Journal:  Nucleic Acids Res       Date:  1985-08-12       Impact factor: 16.971

Review 10.  Antitermination mechanisms in rRNA operons of Escherichia coli.

Authors:  E A Morgan
Journal:  J Bacteriol       Date:  1986-10       Impact factor: 3.490

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