Literature DB >> 6328417

The TGGCA-binding protein: a eukaryotic nuclear protein recognizing a symmetrical sequence on double-stranded linear DNA.

U Borgmeyer, J Nowock, A E Sippel.   

Abstract

Low salt extracts of chicken oviduct nuclei contain a DNA binding protein with high affinity for specific DNA sequences in the flanking regions of the chicken lysozyme gene. Two of the three binding sites found within a total of 11 kb upstream from the promoter are located only 92 bp apart from each other. Upon comparison of the DNA binding sites, the symmetrical consensus sequence 5'- TGGCANNNTGCCA -3' can be deduced as the protein recognition site. This sequence is the central part of 23 to 25 base pairs protected by the DNA binding protein from DNAase I digestion. A homologous binding activity can be detected in nuclei from several chicken tissues and from mouse liver.

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Year:  1984        PMID： 6328417      PMCID： PMC318832          DOI： 10.1093/nar/12.10.4295

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN： 0305-1048            Impact factor:   16.971


  40 in total

1.  A stretch of "late" SV40 viral DNA about 400 bp long which includes the origin of replication is specifically exposed in SV40 minichromosomes.

Authors:  A J Varshavsky; O Sundin; M Bohn
Journal:  Cell       Date:  1979-02       Impact factor: 41.582

2.  DNAse footprinting: a simple method for the detection of protein-DNA binding specificity.

Authors:  D J Galas; A Schmitz
Journal:  Nucleic Acids Res       Date:  1978-09       Impact factor: 16.971

3.  mRNA complexity and egg white protein mRNA content in mature and hormone-withdrawn oviduct.

Authors:  N E Hynes; B Groner; A E Sippel; M C Nguyen-Huu; G Schütz
Journal:  Cell       Date:  1977-08       Impact factor: 41.582

4.  Nucleosome structure, DNA folding, and gene activity.

Authors:  R D Camerini-Otero; B Sollner-Webb; R H Simon; P Williamson; M Zasloff; G Felsenfeld
Journal:  Cold Spring Harb Symp Quant Biol       Date:  1978

5.  Arrangement of coding and intervening sequences of chicken lysozyme gene.

Authors:  W Lindenmaier; M C Nguyen-Huu; R Lurz; M Stratmann; N Blin; T Wurtz; H J Hauser; A E Sippel; G Schütz
Journal:  Proc Natl Acad Sci U S A       Date:  1979-12       Impact factor: 11.205

6.  A simple method for DNA restriction site mapping.

Authors:  H O Smith; M L Birnstiel
Journal:  Nucleic Acids Res       Date:  1976-09       Impact factor: 16.971

7.  The 5' ends of Drosophila heat shock genes in chromatin are hypersensitive to DNase I.

Authors:  C Wu
Journal:  Nature       Date:  1980-08-28       Impact factor: 49.962

8.  Sequencing end-labeled DNA with base-specific chemical cleavages.

Authors:  A M Maxam; W Gilbert
Journal:  Methods Enzymol       Date:  1980       Impact factor: 1.600

9.  Control of cellular content of chicken egg white protein specific RNA during estrogen administration and withdrawal.

Authors:  N E Hynes; B Groner; A E Sippel; S Jeep; T Wurtz; M C Nguyen-Huu; K Giesecke; G Schütz
Journal:  Biochemistry       Date:  1979-02-20       Impact factor: 3.162

10.  Transcriptional control regions of the adenovirus VAI RNA gene.

Authors:  D M Fowlkes; T Shenk
Journal:  Cell       Date:  1980-11       Impact factor: 41.582
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  81 in total

1.  Developmentally regulated recruitment of transcription factors and chromatin modification activities to chicken lysozyme cis-regulatory elements in vivo.

Authors:  Pascal Lefevre; Svitlana Melnik; Nicola Wilson; Arthur D Riggs; Constanze Bonifer
Journal:  Mol Cell Biol       Date:  2003-06       Impact factor: 4.272

Review 2.  The Nuclear Factor I (NFI) gene family in mammary gland development and function.

Authors:  Janice Murtagh; Finian Martin; Richard M Gronostajski
Journal:  J Mammary Gland Biol Neoplasia       Date:  2003-04       Impact factor: 2.673

3.  Cloning, sequencing and characterization of the human alpha glutathione S-transferase gene corresponding to the cDNA clone pGTH2.

Authors:  A Klöne; R Hussnätter; H Sies
Journal:  Biochem J       Date:  1992-08-01       Impact factor: 3.857

4.  The -6.1-kilobase chicken lysozyme enhancer is a multifactorial complex containing several cell-type-specific elements.

Authors:  T Grewal; M Theisen; U Borgmeyer; T Grussenmeyer; R A Rupp; A Stief; F Qian; A Hecht; A E Sippel
Journal:  Mol Cell Biol       Date:  1992-05       Impact factor: 4.272

5.  Functional characterization of the promoter of pp63, a gene encoding a natural inhibitor of the insulin receptor tyrosine kinase.

Authors:  L Falquerho; L Paquereau; M J Vilarem; S Galas; G Patey; A Le Cam
Journal:  Nucleic Acids Res       Date:  1992-04-25       Impact factor: 16.971

6.  Multiple basal promoter elements determine the level of human c-fos transcription.

Authors:  L Runkel; P E Shaw; R E Herrera; R A Hipskind; A Nordheim
Journal:  Mol Cell Biol       Date:  1991-03       Impact factor: 4.272

7.  Nuclear activity from F9 embryonal carcinoma cells binding specifically to the enhancers of wild-type polyoma virus and PyEC mutant DNAs.

Authors:  F K Fujimura
Journal:  Nucleic Acids Res       Date:  1986-04-11       Impact factor: 16.971

8.  Organization of the 3'-boundary of the chicken alpha globin gene domain and characterization of a CR 1-specific protein binding site.

Authors:  G Farache; S V Razin; F R Targa; K Scherrer
Journal:  Nucleic Acids Res       Date:  1990-02-11       Impact factor: 16.971

9.  Hydroxyl radical footprints reveal novel structural features around the NF I binding site in adenovirus DNA.

Authors:  H Zorbas; L Rogge; M Meisterernst; E L Winnacker
Journal:  Nucleic Acids Res       Date:  1989-10-11       Impact factor: 16.971

10.  Analysis of proteins binding to the proximal promoter region of two rat serine protease inhibitor genes.

Authors:  V Rossi; J F Rouayrenc; L Paquereau; M J Vilarem; A Le Cam
Journal:  Nucleic Acids Res       Date:  1992-03-11       Impact factor: 16.971
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