Literature DB >> 6326136

Dictyostelium transposable element DIRS-1 has 350-base-pair inverted terminal repeats that contain a heat shock promoter.

C Zuker, J Cappello, H F Lodish, P George, S Chung.   

Abstract

DIRS-1 is a 4.7-kilobase-pair repetitive and apparently transposable Dictyostelium genetic element that is transcribed during differentiation or after heat shock. The terminal regions of DIRS-1 are inverted repeats of 330 base pairs. The repeats are highly conserved both within a given element as well as between different members of the family (less than 10% divergence). At the distal end of all left repeats is a 32-nucleotide sequence composed almost entirely of A and T residues. In addition to this 32-base A + T sequence, the distal region of all right repeats is extended by a 28-base-pair A + T-rich sequence that is identical in all copies. The sequences flanking each DIRS-1 sequence are completely dissimilar, and there appears to be no duplication of the genomic DNA sequence at the presumed point of DIRS-1 insertion. The terminal repeats can also be found interspersed in the genome independently of the complete element. In addition, the terminal repeats carry a 15-nucleotide sequence that greatly resembles the Drosophila consensus heat shock promoter and may be involved in the transcriptional induction of the DIRS-1 sequences.

Entities:  

Mesh:

Substances:

Year:  1984        PMID: 6326136      PMCID: PMC345129          DOI: 10.1073/pnas.81.9.2660

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  24 in total

1.  DNA sequence of a foldback transposable element in Drosophila.

Authors:  S S Potter
Journal:  Nature       Date:  1982-05-20       Impact factor: 49.962

2.  sigma, a repetitive element found adjacent to tRNA genes of yeast.

Authors:  F J del Rey; T F Donahue; G R Fink
Journal:  Proc Natl Acad Sci U S A       Date:  1982-07       Impact factor: 11.205

3.  Structures of P transposable elements and their sites of insertion and excision in the Drosophila melanogaster genome.

Authors:  K O'Hare; G M Rubin
Journal:  Cell       Date:  1983-08       Impact factor: 41.582

Review 4.  Drosophila genome organization: conserved and dynamic aspects.

Authors:  A C Spradling; G M Rubin
Journal:  Annu Rev Genet       Date:  1981       Impact factor: 16.830

5.  A regulatory upstream promoter element in the Drosophila hsp 70 heat-shock gene.

Authors:  H R Pelham
Journal:  Cell       Date:  1982-09       Impact factor: 41.582

6.  Repetitive Dictyostelium heat-shock promotor functions in Saccharomyces cerevisiae.

Authors:  J Cappello; C Zuker; H F Lodish
Journal:  Mol Cell Biol       Date:  1984-04       Impact factor: 4.272

7.  A repetitive Dictyostelium gene family that is induced during differentiation and by heat shock.

Authors:  C Zuker; J Cappello; R L Chisholm; H F Lodish
Journal:  Cell       Date:  1983-10       Impact factor: 41.582

8.  Target sequences for the C. elegans transposable element Tc1.

Authors:  B Rosenzweig; L W Liao; D Hirsh
Journal:  Nucleic Acids Res       Date:  1983-10-25       Impact factor: 16.971

9.  A repetitive and apparently transposable DNA sequence in Dictyostelium discoideum associated with developmentally regulated RNAs.

Authors:  S Chung; C Zuker; H F Lodish
Journal:  Nucleic Acids Res       Date:  1983-07-25       Impact factor: 16.971

10.  Excision of the DBA ecotropic provirus in dilute coat-color revertants of mice occurs by homologous recombination involving the viral LTRs.

Authors:  N G Copeland; K W Hutchison; N A Jenkins
Journal:  Cell       Date:  1983-06       Impact factor: 41.582

View more
  23 in total

1.  Induction of B2 RNA polymerase III transcription by heat shock: enrichment for heat shock induced sequences in rodent cells by hybridization subtraction.

Authors:  A J Fornace; J B Mitchell
Journal:  Nucleic Acids Res       Date:  1986-07-25       Impact factor: 16.971

2.  Structure and evolution of a family of interspersed repetitive DNA sequences in Caenorhabditis elegans.

Authors:  K M Felsenstein; S W Emmons
Journal:  J Mol Evol       Date:  1987       Impact factor: 2.395

3.  Insertion of an intermediate repetitive sequence into a sea urchin histone-gene spacer.

Authors:  L N Yager; J F Kaumeyer; I Lee; E S Weinberg
Journal:  J Mol Evol       Date:  1987       Impact factor: 2.395

4.  Structure and unusual characteristics of a new family of transposable elements in the sea urchin Strongylocentrotus purpuratus.

Authors:  J B Cohen; B Hoffman-Liebermann; L Kedes
Journal:  Mol Cell Biol       Date:  1985-10       Impact factor: 4.272

5.  Heat shock regulatory elements are present in telomeric repeats of Chironomus thummi.

Authors:  J L Martinez; T Sanchez-Elsner; G Morcillo; J L Diez
Journal:  Nucleic Acids Res       Date:  2001-11-15       Impact factor: 16.971

6.  Mutator-like elements in Arabidopsis thaliana. Structure, diversity and evolution.

Authors:  Z Yu; S I Wright; T E Bureau
Journal:  Genetics       Date:  2000-12       Impact factor: 4.562

7.  Nucleotide sequence of the maize transposable element Mul.

Authors:  R F Barker; D V Thompson; D R Talbot; J Swanson; J L Bennetzen
Journal:  Nucleic Acids Res       Date:  1984-08-10       Impact factor: 16.971

8.  Cellular stress inhibits transposition of the yeast retrovirus-like element Ty3 by a ubiquitin-dependent block of virus-like particle formation.

Authors:  T M Menees; S B Sandmeyer
Journal:  Proc Natl Acad Sci U S A       Date:  1996-05-28       Impact factor: 11.205

9.  The yeast repeated element sigma contains a hormone-inducible promoter.

Authors:  S W Van Arsdell; G L Stetler; J Thorner
Journal:  Mol Cell Biol       Date:  1987-02       Impact factor: 4.272

10.  DIRS1-like retrotransposons are widely distributed among Decapoda and are particularly present in hydrothermal vent organisms.

Authors:  Mathieu Piednoël; Eric Bonnivard
Journal:  BMC Evol Biol       Date:  2009-04-28       Impact factor: 3.260

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.