Literature DB >> 6312417

DNA sequence of the tandem ribosomal RNA promoter for B. subtilis operon rrnB.

G C Stewart, K F Bott.   

Abstract

A new ribosomal RNA operon designated rrnB has been identified by screening a Charon 4a library of cloned B. subtilis sequences. Clones containing the promoter region of this operon are unstable in E. coli unless a special vector possessing a transcriptional terminator is used. DNA sequence data suggests that this operon contains two tandem putative promotor regions not unlike those found in E. coli. There are 92 base pairs separating the two "-10 regions" of the promotors. The second is 180 bp upstream from the start site for mature 16S RNA. A potential 29 base pair stem structure necessary for processing of the mature 16S RNA sequence can also be predicted from this analysis.

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Year:  1983        PMID: 6312417      PMCID: PMC326373          DOI: 10.1093/nar/11.18.6289

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  25 in total

1.  Spliced early mRNAs of simian virus 40.

Authors:  A J Berk; P A Sharp
Journal:  Proc Natl Acad Sci U S A       Date:  1978-03       Impact factor: 11.205

2.  Complete nucleotide sequence of a 16S ribosomal RNA gene from Escherichia coli.

Authors:  J Brosius; M L Palmer; P J Kennedy; H F Noller
Journal:  Proc Natl Acad Sci U S A       Date:  1978-10       Impact factor: 11.205

3.  In vitro transcripts from the rrn B ribosomal RNA cistron originate from two tandem promoters.

Authors:  G Glaser; M Cashel
Journal:  Cell       Date:  1979-01       Impact factor: 41.582

4.  DNA sequences of promoter regions for rRNA operons rrnE and rrnA in E. coli.

Authors:  H A de Boer; S F Gilbert; M Nomura
Journal:  Cell       Date:  1979-05       Impact factor: 41.582

5.  Electron microscope mapping of the distribution of ribosomal genes of the Bacillus subtilis chromosome.

Authors:  L T Chow; N Davidson
Journal:  J Mol Biol       Date:  1973-04-05       Impact factor: 5.469

6.  Analysis of the 5'-terminal nucleotide sequences of ribonucleic acids. II. Comparison of the 5'-terminal nucleotide sequences of ribosomal RNA's from different organisms.

Authors:  M Sugiura; M Takanami
Journal:  Proc Natl Acad Sci U S A       Date:  1967-10       Impact factor: 11.205

7.  Improved estimation of secondary structure in ribonucleic acids.

Authors:  I Tinoco; P N Borer; B Dengler; M D Levin; O C Uhlenbeck; D M Crothers; J Bralla
Journal:  Nat New Biol       Date:  1973-11-14

8.  Titration of the gene sites on DNA by DNA-RNA hybridization. II. The Escherichia coli chromosome.

Authors:  D Kennel
Journal:  J Mol Biol       Date:  1968-05-28       Impact factor: 5.469

9.  The control of ribonucleic acid synthesis during amino acid deprivation in Escherichia coli.

Authors:  R A Lazzarini; A E Dahlberg
Journal:  J Biol Chem       Date:  1971-01-25       Impact factor: 5.157

10.  Partial purification and properties of a ribosomal RNA maturation endonuclease from Bacillus subtilis.

Authors:  M L Sogin; B Pace; N R Pace
Journal:  J Biol Chem       Date:  1977-02-25       Impact factor: 5.157

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  23 in total

1.  Bacillus subtilis δ Factor Functions as a Transcriptional Regulator by Facilitating the Open Complex Formation.

Authors:  Ranjit Kumar Prajapati; Shreya Sengupta; Paulami Rudra; Jayanta Mukhopadhyay
Journal:  J Biol Chem       Date:  2015-11-05       Impact factor: 5.157

2.  Plastid DNA from Pyrenomonas salina (Cryptophyceae): physical map, genes, and evolutionary implications.

Authors:  M Maerz; J Wolters; C J Hofmann; P Sitte; U G Maier
Journal:  Curr Genet       Date:  1992-01       Impact factor: 3.886

Review 3.  Structure and organization of genes for transfer ribonucleic acid in Bacillus subtilis.

Authors:  B S Vold
Journal:  Microbiol Rev       Date:  1985-03

4.  Membrane protein binding to the origin region of Bacillus subtilis.

Authors:  J Laffan; W Firshein
Journal:  J Bacteriol       Date:  1987-09       Impact factor: 3.490

Review 5.  Revised genetic linkage map of Bacillus subtilis.

Authors:  P J Piggot; J A Hoch
Journal:  Microbiol Rev       Date:  1985-06

6.  Separation and analysis of the RNA polymerase binding sites of a complex Bacillus subtilis promoter.

Authors:  S F Le Grice; C C Shih; F Whipple; A L Sonenshein
Journal:  Mol Gen Genet       Date:  1986-08

7.  Heavy involvement of stringent transcription control depending on the adenine or guanine species of the transcription initiation site in glucose and pyruvate metabolism in Bacillus subtilis.

Authors:  Shigeo Tojo; Kanako Kumamoto; Kazutake Hirooka; Yasutaro Fujita
Journal:  J Bacteriol       Date:  2010-01-15       Impact factor: 3.490

8.  Transcription activity of individual rrn operons in Bacillus subtilis mutants deficient in (p)ppGpp synthetase genes, relA, yjbM, and ywaC.

Authors:  Yousuke Natori; Kazumi Tagami; Kana Murakami; Sawako Yoshida; Osamu Tanigawa; Yoonsuh Moh; Kenta Masuda; Tetsuya Wada; Shota Suzuki; Hideaki Nanamiya; Yuzuru Tozawa; Fujio Kawamura
Journal:  J Bacteriol       Date:  2009-05-15       Impact factor: 3.490

9.  Putative promoter region of rRNA operon from archaebacterium Halobacterium halobium.

Authors:  A S Mankin; N L Teterina; P M Rubtsov; L A Baratova; V K Kagramanova
Journal:  Nucleic Acids Res       Date:  1984-08-24       Impact factor: 16.971

10.  Cloning, mapping, and molecular characterization of the rRNA operons of Clostridium perfringens.

Authors:  T Garnier; B Canard; S T Cole
Journal:  J Bacteriol       Date:  1991-09       Impact factor: 3.490

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