Literature DB >> 6304650

Ribosomal 5S genes in relation to C-value in amphibians.

V A Hilder, G A Dawson, M T Vlad.   

Abstract

We have measured the amount of 5S-ribosomal DNA in the genomes of Xenopus laevis, Triturus cristatus carnifex and Ambystoma mexicanum, three species of Amphibians which have widely different C-values. Our best estimate is that these organisms have about 24,000, 32,000 and 61,000 5S-genes per haploid genome respectively. A trend to increasing 5S gene copynumber with increasing C-values in amphibians is apparent, probably linked to the need to supply more ribosomes to the larger cells which are associated with larger genomes, particularly during the critical phases of oogenesis and embryonic cleavage. The correlation between the two is poor however, and whilst C-value may determine a minimum gene copy-number, there appears to be little constraint on exceeding this minimum in some species. Certain problems encountered in measuring gene copy-numbers, i.e. the criterion dependance of such numbers and the effect of having pseudogenes, are highlighted.

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Year:  1983        PMID: 6304650      PMCID: PMC325891          DOI: 10.1093/nar/11.8.2381

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  24 in total

1.  Detection of specific sequences among DNA fragments separated by gel electrophoresis.

Authors:  E M Southern
Journal:  J Mol Biol       Date:  1975-11-05       Impact factor: 5.469

2.  Labeling deoxyribonucleic acid to high specific activity in vitro by nick translation with DNA polymerase I.

Authors:  P W Rigby; M Dieckmann; C Rhodes; P Berg
Journal:  J Mol Biol       Date:  1977-06-15       Impact factor: 5.469

3.  Sequence studies of the 5 S DNA of Xenopus laevis.

Authors:  G G Brownlee; E M Cartwright; D D Brown
Journal:  J Mol Biol       Date:  1974-11-15       Impact factor: 5.469

Review 4.  Specific gene amplification in oocytes. Oocyte nuclei contain extrachromosomal replicas of the genes for ribosomal RNA.

Authors:  D D Brown; I B Dawid
Journal:  Science       Date:  1968-04-19       Impact factor: 47.728

5.  Gene linkage by RNA-DNA hybridization. I. Unique DNA sequences homologous to 4 s RNA, 5 s RNA and ribosomal RNA.

Authors:  D D Brown; C S Weber
Journal:  J Mol Biol       Date:  1968-06-28       Impact factor: 5.469

6.  Differential synthesis of the genes for ribosomal RNA during amphibian oögenesis.

Authors:  J G Gall
Journal:  Proc Natl Acad Sci U S A       Date:  1968-06       Impact factor: 11.205

7.  Identification of the lampbrush chromosome loops which transcribe 5S ribosomal RNA in Notophthalmus (Triturus) viridescens.

Authors:  P J Pukkila
Journal:  Chromosoma       Date:  1975-11-20       Impact factor: 4.316

8.  Quantitative studies of rDNA in amphibians.

Authors:  M Vlad
Journal:  J Cell Sci       Date:  1977-04       Impact factor: 5.285

9.  5 S DNAs of Xenopus laevis and Xenopus mulleri: evolution of a gene family.

Authors:  D D Brown; K Sugimoto
Journal:  J Mol Biol       Date:  1973-08-15       Impact factor: 5.469

10.  Analysis of the C-value paradox by molecular hybridization.

Authors:  M Rosbash; P J Ford; J O Bishop
Journal:  Proc Natl Acad Sci U S A       Date:  1974-09       Impact factor: 11.205

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  3 in total

1.  Systematic analysis and evolution of 5S ribosomal DNA in metazoans.

Authors:  J Vierna; S Wehner; C Höner zu Siederdissen; A Martínez-Lage; M Marz
Journal:  Heredity (Edinb)       Date:  2013-07-10       Impact factor: 3.821

2.  Molecular and cytogenetic organization of the 5S ribosomal DNA array in chicken (Gallus gallus).

Authors:  Laura M Daniels; Mary E Delany
Journal:  Chromosome Res       Date:  2003       Impact factor: 5.239

3.  Higher-order organisation of extremely amplified, potentially functional and massively methylated 5S rDNA in European pikes (Esox sp.).

Authors:  Radka Symonová; Konrad Ocalewicz; Lech Kirtiklis; Giovanni Battista Delmastro; Šárka Pelikánová; Sonia Garcia; Aleš Kovařík
Journal:  BMC Genomics       Date:  2017-05-18       Impact factor: 3.969

  3 in total

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