Literature DB >> 6304639

Organization of gene and non-gene sequences in micronuclear DNA of Oxytricha nova.

R E Boswell, C L Jahn, A F Greslin, D M Prescott.   

Abstract

In order to study the derivation of the macronuclear genome from the micronuclear genome in Oxytricha nova micronuclear DNA was partially digested with EcoRI, size fractionated, and then cloned in the lambda phage Charon 8. Clones were selected a) at random b) by hybridization with macronuclear DNA or c) by hybridization with clones of macronuclear DNA. One group of these clones contains only unique sequence DNA, and all of these had sequences that were homologous to macronuclear sequences. The number of macronuclear genes with sequences homologous to these micronuclear clones indicates that macronuclear sequences are clustered in the micronuclear genome. Many micronuclear clones contain repetitive DNA sequences and hybridize to numerous EcoRI fragments of total micronuclear DNA, yielding similar but non-identical patterns. Some micronuclear clones containing these repetitive sequences also contained unique sequence DNA that hybridized to a macronuclear sequence. These clones define a major interspersed repetitive sequence family in the micronuclear genome that is eliminated during formation of the macronuclear genome.

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Year:  1983        PMID: 6304639      PMCID: PMC325993          DOI: 10.1093/nar/11.11.3651

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  23 in total

1.  Ligation of EcoRI endonuclease-generated DNA fragments into linear and circular structures.

Authors:  A Dugaiczyk; H W Boyer; H M Goodman
Journal:  J Mol Biol       Date:  1975-07-25       Impact factor: 5.469

2.  Detection of specific sequences among DNA fragments separated by gel electrophoresis.

Authors:  E M Southern
Journal:  J Mol Biol       Date:  1975-11-05       Impact factor: 5.469

3.  The determination of the molecular weight of ribonucleic acid by polyacrylamide-gel electrophresis. The effects of changes in conformation.

Authors:  U E Loening
Journal:  Biochem J       Date:  1969-06       Impact factor: 3.857

4.  DNA of ciliated protozoa: DNA sequence diminution during macronuclear development of Oxytricha.

Authors:  M R Lauth; B B Spear; J Heumann; D M Prescott
Journal:  Cell       Date:  1976-01       Impact factor: 41.582

5.  Chromosome structure in ciliated protozoans.

Authors:  D M Prescott; K G Murti
Journal:  Cold Spring Harb Symp Quant Biol       Date:  1974

6.  A system for mapping DNA sequences in the chromosomes of Drosophila melanogaster.

Authors:  P C Wensink; D J Finnegan; J E Donelson; D S Hogness
Journal:  Cell       Date:  1974-12       Impact factor: 41.582

7.  The relationship between genes and polytene chromosome bands.

Authors:  G Lefevre
Journal:  Annu Rev Genet       Date:  1974       Impact factor: 16.830

8.  A membrane-filter technique for the detection of complementary DNA.

Authors:  D T Denhardt
Journal:  Biochem Biophys Res Commun       Date:  1966-06-13       Impact factor: 3.575

9.  Nucleotide sequence of the rightward operator of phage lambda.

Authors:  T Maniatis; A Jeffrey; D G Kleid
Journal:  Proc Natl Acad Sci U S A       Date:  1975-03       Impact factor: 11.205

10.  Isolation of the bacteriophage lambda A-gene protein.

Authors:  A Becker; M Gold
Journal:  Proc Natl Acad Sci U S A       Date:  1975-02       Impact factor: 11.205

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  9 in total

1.  Micronuclear genome organization in Euplotes crassus: a transposonlike element is removed during macronuclear development.

Authors:  S E Baird; G M Fino; S L Tausta; L A Klobutcher
Journal:  Mol Cell Biol       Date:  1989-09       Impact factor: 4.272

2.  Differential replication and DNA elimination in the polytene chromosomes of Euplotes crassus.

Authors:  J S Frels; C M Tebeau; S Z Doktor; C L Jahn
Journal:  Mol Biol Cell       Date:  1996-05       Impact factor: 4.138

3.  Genomic organization and developmental fate of adjacent repeated sequences in a foldback DNA clone of Tetrahymena thermophila.

Authors:  A H Tschunko; R H Loechel; N C McLaren; S L Allen
Journal:  Genetics       Date:  1987-11       Impact factor: 4.562

4.  Gene-sized macronuclear DNA molecules are clustered in micronuclear chromosomes of the ciliate Oxytricha nova.

Authors:  L A Klobutcher; A M Vailonis-Walsh; K Cahill; R M Ribas-Aparicio
Journal:  Mol Cell Biol       Date:  1986-11       Impact factor: 4.272

5.  Reordering of nine exons is necessary to form a functional actin gene in Oxytricha nova.

Authors:  A F Greslin; D M Prescott; Y Oka; S H Loukin; J C Chappell
Journal:  Proc Natl Acad Sci U S A       Date:  1989-08       Impact factor: 11.205

Review 6.  The DNA of ciliated protozoa.

Authors:  D M Prescott
Journal:  Microbiol Rev       Date:  1994-06

7.  Three different macronuclear DNAs in Oxytricha fallax share a common sequence block.

Authors:  S W Cartinhour; G A Herrick
Journal:  Mol Cell Biol       Date:  1984-05       Impact factor: 4.272

8.  The architecture of a scrambled genome reveals massive levels of genomic rearrangement during development.

Authors:  Xiao Chen; John R Bracht; Aaron David Goldman; Egor Dolzhenko; Derek M Clay; Estienne C Swart; David H Perlman; Thomas G Doak; Andrew Stuart; Chris T Amemiya; Robert P Sebra; Laura F Landweber
Journal:  Cell       Date:  2014-08-28       Impact factor: 41.582

9.  Micronuclear DNA of Oxytricha nova contains sequences with autonomously replicating activity in Saccharomyces cerevisiae.

Authors:  M M Colombo; M T Swanton; P Donini; D M Prescott
Journal:  Mol Cell Biol       Date:  1984-09       Impact factor: 4.272

  9 in total

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