Literature DB >> 6292841

Accurate in vitro splicing of human beta-globin RNA.

R Kole, S M Weissman.   

Abstract

Human beta-globin RNA transcribed from an exogenous DNA template is spliced in vitro by concentrated whole cell extracts from HeLa cells. Using the primer extension technique, we have shown that the small intervening sequence is spliced accurately and that the sequence of the product across the splice junction is identical to that of beta-globin mRNA prepared from human reticulocytes. The efficiency of the splicing reaction is low. The RNA transcript containing both introns and terminated upstream from the polyadenylation site is spliced most efficiently. The transcript which is terminated downstream from the polyadenylation site is not spliced at all. Thalassemic beta-globin RNA which carries an extra splice site in the small intron is also spliced, albeit with a low yield.

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Year:  1982        PMID: 6292841      PMCID: PMC320887          DOI: 10.1093/nar/10.18.5429

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  24 in total

Review 1.  RNA processing and the intervening sequence problem.

Authors:  J Abelson
Journal:  Annu Rev Biochem       Date:  1979       Impact factor: 23.643

2.  Mammalian deoxyribonucleic acid-dependent ribonucleic acid polymerases. I. Purification and properties of an -amanitin-sensitive ribonucleic acid polymerase and stimulatory factors from HeLa and KB cells.

Authors:  B Sugden; W Keller
Journal:  J Biol Chem       Date:  1973-06-10       Impact factor: 5.157

3.  Determination of RNA sequences by primer directed synthesis and sequencing of their cDNA transcripts.

Authors:  P K Ghosh; V B Reddy; M Piatak; P Lebowitz; S M Weissman
Journal:  Methods Enzymol       Date:  1980       Impact factor: 1.600

4.  RNA synthesis in isolated nuclei: identification and comparison of adenovirus 2 encoded transcripts synthesized in vitro and vivo.

Authors:  J L Manley; P A Sharp; M L Gefter
Journal:  J Mol Biol       Date:  1979-11-25       Impact factor: 5.469

5.  Cloning and characterization of DNA sequences surrounding the human gamma-, delta-, and beta-globin genes.

Authors:  R E Kaufman; P J Kretschmer; J W Adams; H C Coon; W F Anderson; A W Nienhuis
Journal:  Proc Natl Acad Sci U S A       Date:  1980-07       Impact factor: 11.205

6.  The use of thin acrylamide gels for DNA sequencing.

Authors:  F Sanger; A R Coulson
Journal:  FEBS Lett       Date:  1978-03-01       Impact factor: 4.124

7.  DNA-dependent transcription of adenovirus genes in a soluble whole-cell extract.

Authors:  J L Manley; A Fire; A Cano; P A Sharp; M L Gefter
Journal:  Proc Natl Acad Sci U S A       Date:  1980-07       Impact factor: 11.205

8.  Are snRNPs involved in splicing?

Authors:  M R Lerner; J A Boyle; S M Mount; S L Wolin; J A Steitz
Journal:  Nature       Date:  1980-01-10       Impact factor: 49.962

9.  The isolation and characterization of linked delta- and beta-globin genes from a cloned library of human DNA.

Authors:  R M Lawn; E F Fritsch; R C Parker; G Blake; T Maniatis
Journal:  Cell       Date:  1978-12       Impact factor: 41.582

10.  Beta Thalassemia: mutations which affect processing of the beta-Globin mRNA precursor.

Authors:  J A Kantor; P H Turner; A W Nienhuis
Journal:  Cell       Date:  1980-08       Impact factor: 41.582

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  26 in total

1.  Coupled in vitro synthesis and splicing of RNA polymerase II transcripts.

Authors:  S Ghosh; M A Garcia-Blanco
Journal:  RNA       Date:  2000-09       Impact factor: 4.942

2.  Concurrent splicing and transcription are not sufficient to enhance splicing efficiency.

Authors:  Denis Lazarev; James L Manley
Journal:  RNA       Date:  2007-07-13       Impact factor: 4.942

3.  Transcription of a legumin gene from pea (Pisum sativum L.) in vitro.

Authors:  I M Evans; D Bown; G W Lycett; R R Croy; D Boulter; J A Gatehouse
Journal:  Planta       Date:  1985-09       Impact factor: 4.116

4.  In vitro splicing of simian virus 40 early pre mRNA.

Authors:  J C Noble; C Prives; J L Manley
Journal:  Nucleic Acids Res       Date:  1986-02-11       Impact factor: 16.971

5.  A 5' exo-ribonuclease and RNA ligase of T. brucei.

Authors:  J Huang; L H Van der Ploeg
Journal:  Nucleic Acids Res       Date:  1988-10-25       Impact factor: 16.971

6.  Preferential excision of the 5' proximal intron from mRNA precursors with two introns as mediated by the cap structure.

Authors:  M Ohno; H Sakamoto; Y Shimura
Journal:  Proc Natl Acad Sci U S A       Date:  1987-08       Impact factor: 11.205

7.  Multiple interactions between the splicing substrate and small nuclear ribonucleoproteins in spliceosomes.

Authors:  B Chabot; J A Steitz
Journal:  Mol Cell Biol       Date:  1987-01       Impact factor: 4.272

8.  Efficient coupled transcription and mRNA splicing in vitro using plasmids derived from early region 3 of adenovirus 2 and a nondefective adenovirus-simian virus 40 hybrid.

Authors:  S Pawar; C M Ahmed; R Watkins; S Zain
Journal:  Proc Natl Acad Sci U S A       Date:  1984-05       Impact factor: 11.205

9.  Isolation and characterization of the RNA2, RNA3, and RNA11 genes of Saccharomyces cerevisiae.

Authors:  R L Last; J B Stavenhagen; J L Woolford
Journal:  Mol Cell Biol       Date:  1984-11       Impact factor: 4.272

10.  The different intron 2 species excised in vivo from the E2A premRNA of adenovirus-2: an approach to analyse alternative splicing.

Authors:  P Keohavong; R Gattoni; P Schmitt; J Stévenin
Journal:  Nucleic Acids Res       Date:  1986-07-11       Impact factor: 16.971

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