Literature DB >> 6275362

Analysis of transcription of the human Alu family ubiquitous repeating element by eukaryotic RNA polymerase III.

S A Fuhrman, P L Deininger, P LaPorte, T Friedmann, E P Geiduschek.   

Abstract

A series of clones that contain human Alu family elements are actively transcribed in soluble in vitro RNA polymerase III systems. The 5' ends of the in vitro transcripts are located about 170 nucleotides upstream of the eponymous Alu I site of the repeat, while a region associated with specifying of the initiation site for in vitro transcription lies in the region between 79 and 106 nucleotides upstream of the central Alu site. Thus, the RNA polymerase III transcription unit defined by the human Alu family is similar to other RNA polymerase III transcription units in possessing an internal region that is required for active transcription in vitro.

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Year:  1981        PMID: 6275362      PMCID: PMC327615          DOI: 10.1093/nar/9.23.6439

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  35 in total

1.  An electron microscope study of the DNA sequence organization of the human genome.

Authors:  P L Deininger; C W Schmid
Journal:  J Mol Biol       Date:  1976-09-25       Impact factor: 5.469

2.  RNA polymerase III transcriptional units are interspersed among human non-alpha-globin genes.

Authors:  C Duncan; P A Biro; P V Choudary; J T Elder; R R Wang; B G Forget; J K de Riel; S M Weissman
Journal:  Proc Natl Acad Sci U S A       Date:  1979-10       Impact factor: 11.205

3.  Transcription and processing of intervening sequences in yeast tRNA genes.

Authors:  G Knapp; J S Beckmann; P F Johnson; S A Fuhrman; J Abelson
Journal:  Cell       Date:  1978-06       Impact factor: 41.582

4.  Mapping of RNA by a modification of the Berk-Sharp procedure: the 5' termini of 15 S beta-globin mRNA precursor and mature 10 s beta-globin mRNA have identical map coordinates.

Authors:  R F Weaver; C Weissmann
Journal:  Nucleic Acids Res       Date:  1979-11-10       Impact factor: 16.971

5.  A mutation which alters initiation of transcription by RNA polymerase III on the Ad5 chromosome.

Authors:  B Thimmappaya; N Jones; T Shenk
Journal:  Cell       Date:  1979-12       Impact factor: 41.582

6.  A ubiquitous family of repeated DNA sequences in the human genome.

Authors:  C M Houck; F P Rinehart; C W Schmid
Journal:  J Mol Biol       Date:  1979-08-15       Impact factor: 5.469

7.  Rapid sequence determination of late simian virus 40 16S mRNA leader by using inhibitors of reverse transcriptase.

Authors:  M Bina-Stein; M Thoren; N Salzman; J A Thomspon
Journal:  Proc Natl Acad Sci U S A       Date:  1979-02       Impact factor: 11.205

8.  Selective and accurate initiation of transcription at the Ad2 major late promotor in a soluble system dependent on purified RNA polymerase II and DNA.

Authors:  P A Weil; D S Luse; J Segall; R G Roeder
Journal:  Cell       Date:  1979-10       Impact factor: 41.582

9.  Delimitation of a promoter for RNA polymerase III by means of a functional test.

Authors:  J L Telford; A Kressmann; R A Koski; R Grosschedl; F Müller; S G Clarkson; M L Birnstiel
Journal:  Proc Natl Acad Sci U S A       Date:  1979-06       Impact factor: 11.205

10.  Identification of a RNA polymerase II initiation site in the long terminal repeat of Moloney murine leukemia viral DNA.

Authors:  S A Fuhrman; C Van Beveren; I M Verma
Journal:  Proc Natl Acad Sci U S A       Date:  1981-09       Impact factor: 11.205

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  53 in total

1.  Cis-acting influences on Alu RNA levels.

Authors:  C Alemán; A M Roy-Engel; T H Shaikh; P L Deininger
Journal:  Nucleic Acids Res       Date:  2000-12-01       Impact factor: 16.971

Review 2.  The role of Alu elements in the cis-regulation of RNA processing.

Authors:  Chammiran Daniel; Mikaela Behm; Marie Öhman
Journal:  Cell Mol Life Sci       Date:  2015-07-30       Impact factor: 9.261

3.  Analysis of 5' junctions of human LINE-1 and Alu retrotransposons suggests an alternative model for 5'-end attachment requiring microhomology-mediated end-joining.

Authors:  Nora Zingler; Ute Willhoeft; Hans-Peter Brose; Volker Schoder; Thomas Jahns; Kay-Martin O Hanschmann; Tammy A Morrish; Johannes Löwer; Gerald G Schumann
Journal:  Genome Res       Date:  2005-06       Impact factor: 9.043

4.  Alu transcripts: cytoplasmic localisation and regulation by DNA methylation.

Authors:  W M Liu; R J Maraia; C M Rubin; C W Schmid
Journal:  Nucleic Acids Res       Date:  1994-03-25       Impact factor: 16.971

5.  T4-induced alpha- and beta-glucosyltransferase: cloning of the genes and a comparison of their products based on sequencing data.

Authors:  J Tomaschewski; H Gram; J W Crabb; W Rüger
Journal:  Nucleic Acids Res       Date:  1985-11-11       Impact factor: 16.971

6.  Mg-SINE: a short interspersed nuclear element from the rice blast fungus, Magnaporthe grisea.

Authors:  P Kachroo; S A Leong; B B Chattoo
Journal:  Proc Natl Acad Sci U S A       Date:  1995-11-21       Impact factor: 11.205

7.  Multiple dispersed loci produce small cytoplasmic Alu RNA.

Authors:  R J Maraia; C T Driscoll; T Bilyeu; K Hsu; G J Darlington
Journal:  Mol Cell Biol       Date:  1993-07       Impact factor: 4.272

8.  Isolation of a genomic clone partially encoding human hypoxanthine phosphoribosyltransferase.

Authors:  D J Jolly; A C Esty; H U Bernard; T Friedmann
Journal:  Proc Natl Acad Sci U S A       Date:  1982-08       Impact factor: 11.205

9.  Characterization of a third major SINE family of repetitive sequences in the galago genome.

Authors:  G R Daniels; P L Deininger
Journal:  Nucleic Acids Res       Date:  1991-04-11       Impact factor: 16.971

10.  Human apolipoproteins AI, AII, CII and CIII. cDNA sequences and mRNA abundance.

Authors:  C R Sharpe; A Sidoli; C S Shelley; M A Lucero; C C Shoulders; F E Baralle
Journal:  Nucleic Acids Res       Date:  1984-05-11       Impact factor: 16.971

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