Literature DB >> 6273821

The primary structure of bovine satellite 1.715.

C Gaillard, J Doly, J Cortadas, G Bernardi.   

Abstract

The primary structure of the 1402 bp repeat unit of bovine satellite 1.715 has been determined using a dimer inserted at the SalI site of plasmid pBR322 and cloned in E. coli. In contrast with bovine satellites 1.706, 1.720b and 1.711a, the 1.715 satellite has a complex sequence with no obvious internal short prototype repeat. The sequence consists however of repeats ranging in length from 6 to 13 nucleotides. In addition, the hexanucleotide, AGATGA, present in the prototype sequences of satellites 1.706, 1.720b and 1.711a, is found in satellite 1.715 in repeats as long as, or longer than, 8 nucleotides, establishing a homology link among those satellites on one hand and satellite 1.715 (and the related satellite 1.711b) on the other. In turn, this suggests a common evolutionary origin. A comparison of the maps for 15 restriction enzymes of cloned and uncloned satellite indicates very little sequence divergence among the repeat units of the latter, most of the differences being due to methylation.

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Year:  1981        PMID: 6273821      PMCID: PMC327584          DOI: 10.1093/nar/9.22.6069

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  20 in total

1.  An analysis of the bovine genome by density gradient centrifugation: fractionation in Cs2SO4/3,6-bis(acetatomercurimethyl)dioxane density gradient.

Authors:  J Cortadas; G Macaya; G Bernardi
Journal:  Eur J Biochem       Date:  1977-06-01

2.  A new method for sequencing DNA.

Authors:  A M Maxam; W Gilbert
Journal:  Proc Natl Acad Sci U S A       Date:  1977-02       Impact factor: 11.205

3.  Isolation and organization of calf ribosomal DNA.

Authors:  M Meunier-Rotival; J Cortadas; G Macaya; G Bernardi
Journal:  Nucleic Acids Res       Date:  1979       Impact factor: 16.971

4.  An analysis of the bovine genome by density-gradient centrifugation. Preparation of the dG+dC-rich DNA components.

Authors:  G Macaya; J Cortadas; G Bernardi
Journal:  Eur J Biochem       Date:  1978-03

5.  Restriction enzyme analysis of satellite DNA components from the bovine genome.

Authors:  H Kopecka; G Macaya; J Cortadas; J P Thiéry; G Bernardi
Journal:  Eur J Biochem       Date:  1978-03

6.  A long-range and two short-range periodicities are superimposed in the 1.706-g/cm3 satellite DNA from calf thymus.

Authors:  R E Streeck; H G Zachau
Journal:  Eur J Biochem       Date:  1978-08-15

7.  Investigation of the repetitive sequences in calf DNA by cleavage with restriction nucleases.

Authors:  P Philippsen; R E Streeck; H G Zachau
Journal:  Eur J Biochem       Date:  1975-09-01

8.  Construction and characterization of new cloning vehicles. II. A multipurpose cloning system.

Authors:  F Bolivar; R L Rodriguez; P J Greene; M C Betlach; H L Heyneker; H W Boyer; J H Crosa; S Falkow
Journal:  Gene       Date:  1977       Impact factor: 3.688

9.  A possible structure for calf satellite DNA I.

Authors:  G Roizes
Journal:  Nucleic Acids Res       Date:  1976-10       Impact factor: 16.971

10.  Patchwork structure of a bovine satellite DNA.

Authors:  M Pech; R E Streeck; H G Zachau
Journal:  Cell       Date:  1979-11       Impact factor: 41.582

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  19 in total

1.  Stable methylation patterns in interspecific antelope hybrids and the characterization and localization of a satellite fraction in the Alcelaphini and Hippotragini.

Authors:  T J Robinson; O Wittekindt; J J Pasantes; W S Modi; W Schempp; D J Morris-Rosendahl
Journal:  Chromosome Res       Date:  2000       Impact factor: 5.239

2.  Centromeric heterochromatin in the cattle rob(1;29) translocation: alpha-satellite I sequences, in-situ MspI digestion patterns, chromomycin staining and C-bands.

Authors:  R Chaves; J S Heslop-Harrsion; H Guedes-Pinto
Journal:  Chromosome Res       Date:  2000       Impact factor: 5.239

3.  Evolutionary histories of highly repeated DNA families among the Artiodactyla (Mammalia).

Authors:  W S Modi; D S Gallagher; J E Womack
Journal:  J Mol Evol       Date:  1996-03       Impact factor: 2.395

4.  Distribution and sequence homogeneity of an abundant satellite DNA in the beetle, Tenebrio molitor.

Authors:  C A Davis; G R Wyatt
Journal:  Nucleic Acids Res       Date:  1989-07-25       Impact factor: 16.971

5.  DNase I sensitivity in facultative and constitutive heterochromatin.

Authors:  K Sperling; B S Kerem; R Goitein; V Kottusch; H Cedar; M Marcus
Journal:  Chromosoma       Date:  1985       Impact factor: 4.316

6.  Conservation of a 31-bp bovine subrepeat in centromeric satellite DNA monomers of Cervus elaphus and other cervid species.

Authors:  C Lee; C C Lin
Journal:  Chromosome Res       Date:  1996-09       Impact factor: 5.239

7.  Tissue specificity and clustering of methylated cystosines in bovine satellite I DNA.

Authors:  H Sano; R Sager
Journal:  Proc Natl Acad Sci U S A       Date:  1982-06       Impact factor: 11.205

8.  Base sequence of a cloned snake W-chromosome DNA fragment and identification of a male-specific putative mRNA in the mouse.

Authors:  J T Epplen; J R McCarrey; S Sutou; S Ohno
Journal:  Proc Natl Acad Sci U S A       Date:  1982-06       Impact factor: 11.205

9.  A highly repetitive DNA component common to all Cervidae: its organization and chromosomal distribution during evolution.

Authors:  J M Bogenberger; H Neitzel; F Fittler
Journal:  Chromosoma       Date:  1987       Impact factor: 4.316

10.  Sequence analysis of bovine satellite I DNA (1.715 gm/cm3).

Authors:  E J Taparowsky; S A Gerbi
Journal:  Nucleic Acids Res       Date:  1982-02-25       Impact factor: 16.971

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