Literature DB >> 6272288

Deoxyribonuclease I sensitivity of plasmid genomes in teratocarcinoma-derived stem and differentiated cells.

K Huebner, A Linnenbach, S Weidner, G Glenn, C M Croce.   

Abstract

The DNase I (EC 3.1.21.1) sensitivities of the simian virus 40 (SV40) genome, the pBR322 genome, and the herpes simplex virus type 1 thymidine kinase (HSV-1 tk) gene have been compared in teratocarcinoma-derived stem (12-1) and differentiated (12-1a) cell lines established by transfection of thymidine kinase (ATP:thymidine 5'-phosphotransferase, EC 2.7.1.21)-deficient F9 cells with DNA from a tripartite plasmid genome consisting of the pBR322 genome, the SV40 genome, and the HSV-1 tk gene. HSV-1 tk is present in both stem and differentiated cells; SV40 early proteins are present in differentiated cells but not in stem cells; the pBR322 genome is not expressed in either cell type. The SV40 and pBR322 genomes are more sensitive to DNase I digestion in stem cells than in differentiated cells, reflecting the DNase I-hypersensitivity of total stem-cell chromatin. The HSV-1 tk gene is the least sensitive to DNase I digestion in both cell types.

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Year:  1981        PMID: 6272288      PMCID: PMC320334          DOI: 10.1073/pnas.78.8.5071

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  30 in total

1.  A stretch of "late" SV40 viral DNA about 400 bp long which includes the origin of replication is specifically exposed in SV40 minichromosomes.

Authors:  A J Varshavsky; O Sundin; M Bohn
Journal:  Cell       Date:  1979-02       Impact factor: 41.582

2.  Sites in simian virus 40 chromatin which are preferentially cleaved by endonucleases.

Authors:  W A Scott; D J Wigmore
Journal:  Cell       Date:  1978-12       Impact factor: 41.582

3.  Regulation of expression and chromosomal subunit conformation of avian retrovirus genomes.

Authors:  M Groudine; S Das; P Neiman; H Weintraub
Journal:  Cell       Date:  1978-08       Impact factor: 41.582

4.  Staphylococcal nuclease makes a single non-random cut in the simian virus 40 viral minichromosome.

Authors:  O Sundin; A Varshavsky
Journal:  J Mol Biol       Date:  1979-08-15       Impact factor: 5.469

Review 5.  Chromatin.

Authors:  G Felsenfeld
Journal:  Nature       Date:  1978-01-12       Impact factor: 49.962

6.  The chromatin structure of specific genes: II. Disruption of chromatin structure during gene activity.

Authors:  C Wu; Y C Wong; S C Elgin
Journal:  Cell       Date:  1979-04       Impact factor: 41.582

7.  The chromatin structure of specific genes: I. Evidence for higher order domains of defined DNA sequence.

Authors:  C Wu; P M Bingham; K J Livak; R Holmgren; S C Elgin
Journal:  Cell       Date:  1979-04       Impact factor: 41.582

8.  Transcription of viral sequences in cells transformed by adenovirus Type 5.

Authors:  E I Frolova; E S Zalmanzon
Journal:  Virology       Date:  1978-09       Impact factor: 3.616

9.  Physical properties of DNA and chromatin isolated from G1- and S-phase HeLa S-3 cells. Effects of histone H1 phosphorylation and stage-specific nonhistone chromosomal proteins on the molar ellipticity of native and reconstituted nucleoproteins during thermal denaturation.

Authors:  T N Dolby; K Ajiro; T W Borun; R S Gilmour; A Zweidler; L Cohen; P Miller; C Nieolini
Journal:  Biochemistry       Date:  1979-04-03       Impact factor: 3.162

10.  Studies of the transcription of viral genome in adenovirus 5 transformed cells.

Authors:  E I Frolova; E S Zalmanzon; E M Lukanidin; G P Georgiev
Journal:  Nucleic Acids Res       Date:  1978-01       Impact factor: 16.971

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  4 in total

1.  Suppression of the hypomethylated Moloney leukemia virus genome in undifferentiated teratocarcinoma cells and inefficiency of transformation by a bacterial gene under control of the long terminal repeat.

Authors:  O Niwa
Journal:  Mol Cell Biol       Date:  1985-09       Impact factor: 4.272

2.  Prepatterning in the stem cell compartment.

Authors:  Peter D Tonge; Victor Olariu; Daniel Coca; Visakan Kadirkamanathan; Kelly E Burrell; Stephen A Billings; Peter W Andrews
Journal:  PLoS One       Date:  2010-05-28       Impact factor: 3.240

3.  Regulated expression of a transfected human cardiac actin gene during differentiation of multipotential murine embryonal carcinoma cells.

Authors:  M A Rudnicki; M Ruben; M W McBurney
Journal:  Mol Cell Biol       Date:  1988-01       Impact factor: 4.272

4.  Control of expression of histocompatibility antigens (H-2) and beta 2-microglobulin in F9 teratocarcinoma stem cells.

Authors:  C M Croce; A Linnenbach; K Huebner; J R Parnes; D H Margulies; E Appella; J G Seidman
Journal:  Proc Natl Acad Sci U S A       Date:  1981-09       Impact factor: 11.205

  4 in total

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