Literature DB >> 6261223

Isolation, characterization and restriction endonuclease mapping of the Petunia hybrida chloroplast DNA.

W A Bovenberg, A J Kool, H J Nijkamp.   

Abstract

A procedure is developed for the isolation of intact chloroplast DNA (ctDNA) from Petunia hybrida. The molecular weight, calculated from contour length measurements, is 96.0 +/- 4.5 x 10(6) daltons. This value is in good agreement with the value of 101.2 x 10(6) daltons that was estimated from the electrophoretic mobilities of restriction endonuclease fragments of ctDNA. Analysis of petunia ctDNA in neutral CsCl gradients revealed the presence of only one type of DNA at a buoyant density of 1.6987 +/- 0.0005 gcm-3. This corresponds with a GC-content of 39.3 +/- 0.5%. A physical map of petunia ctDNA was constructed by using the restriction endonucleases Sal I, Bgl I, Hpa I and Kpn I. The map indicates that petunia ctDNA contains two copies of a sequence in an inverted orientation. The inverted repeat regions have a minimum length of 10 x 10(6) daltons. Hybridization data indicate that part of the inverted repeat regions contain the genes for chloroplast ribosomal RNAs.

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Year:  1981        PMID: 6261223      PMCID: PMC327218          DOI: 10.1093/nar/9.3.503

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  14 in total

1.  Bacteriocinogenic Clo DF13 minicells of Escherichia coli synthesize a protein that accounts for immunity to bacteriocin Clo DF13: purification and characterization of the immunity protein.

Authors:  A J Kool; C Pols; H J Nijkamp
Journal:  Antimicrob Agents Chemother       Date:  1975-07       Impact factor: 5.191

2.  The molecular size and conformation of the chloroplast DNA from higher plants.

Authors:  R Kolodner; K K Tewari
Journal:  Biochim Biophys Acta       Date:  1975-09-01

3.  Inverted repeats in chloroplast DNA from higher plants.

Authors:  R Kolodner; K K Tewari
Journal:  Proc Natl Acad Sci U S A       Date:  1979-01       Impact factor: 11.205

4.  Determination of the base composition of deoxyribonucleic acid from its buoyant density in CsCl.

Authors:  C L SCHILDKRAUT; J MARMUR; P DOTY
Journal:  J Mol Biol       Date:  1962-06       Impact factor: 5.469

5.  Labeling deoxyribonucleic acid to high specific activity in vitro by nick translation with DNA polymerase I.

Authors:  P W Rigby; M Dieckmann; C Rhodes; P Berg
Journal:  J Mol Biol       Date:  1977-06-15       Impact factor: 5.469

6.  Efficient transfer of large DNA fragments from agarose gels to diazobenzyloxymethyl-paper and rapid hybridization by using dextran sulfate.

Authors:  G M Wahl; M Stern; G R Stark
Journal:  Proc Natl Acad Sci U S A       Date:  1979-08       Impact factor: 11.205

7.  Anatomy of the chloroplast ribosomal DNA of Chlamydomonas reinhardii.

Authors:  J D Rochaix; P Malnoe
Journal:  Cell       Date:  1978-10       Impact factor: 41.582

8.  Restriction endonuclease map of the chloroplast DNA of Chlamydomonas reinhardii.

Authors:  J D Rochaix
Journal:  J Mol Biol       Date:  1978-12-25       Impact factor: 5.469

9.  Endonuclease recognition sites mapped on Zea mays chloroplast DNA.

Authors:  J R Bedbrook; L Bogorad
Journal:  Proc Natl Acad Sci U S A       Date:  1976-12       Impact factor: 11.205

10.  Mapping of the ribosomal RNA genes on spinach chloroplast DNA.

Authors:  P R Whitfeld; R G Herrmann; W Bottomley
Journal:  Nucleic Acids Res       Date:  1978-06       Impact factor: 16.971

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  22 in total

1.  Rearrangements in the chloroplast genomes of mung bean and pea.

Authors:  J D Palmer; W F Thompson
Journal:  Proc Natl Acad Sci U S A       Date:  1981-09       Impact factor: 11.205

2.  Complete cloning of the chloroplast genome of safflower in lambda EMBL3 and mapping of 23S and 16S rRNA genes.

Authors:  M T Tippetts; D L Robertson; M A Smith
Journal:  Mol Cell Biochem       Date:  1991-01-16       Impact factor: 3.396

3.  Plastid gene expression in a yellow-green leaf mutant of Petunia hybrida.

Authors:  C M Colijn; J N Mol; A J Kool; H J Nijkamp
Journal:  Planta       Date:  1983-04       Impact factor: 4.116

4.  Chloroplast DNA evolution and the origin of amphidiploid Brassica species.

Authors:  J D Palmer; C R Shields; D B Cohen; T J Orton
Journal:  Theor Appl Genet       Date:  1983-05       Impact factor: 5.699

5.  Restriction endonuclease analysis of chloroplast DNA in interspecies somatic Hybrids of Petunia.

Authors:  A Kumar; E C Cocking; W A Bovenberg; A J Kool
Journal:  Theor Appl Genet       Date:  1982-12       Impact factor: 5.699

6.  Isolation and physicochemical characterization of mitochondrial DNA from cultured cells ofPetunia hybrida.

Authors:  A J Kool; J M de Haas; J N Mol; G A van Marrewijk
Journal:  Theor Appl Genet       Date:  1985-05       Impact factor: 5.699

7.  Transcriptional and post-transcriptional regulation of chloroplast gene expression in Petunia hybrida.

Authors:  M Q van Grinsven; J J Gielen; J L Zethof; H J Nijkamp; A J Kool
Journal:  Theor Appl Genet       Date:  1986-11       Impact factor: 5.699

8.  Genetic analyses of Oryza species by molecular markers for chloroplast genomes.

Authors:  H Ichikawa; A Hirai; T Katayama
Journal:  Theor Appl Genet       Date:  1986-06       Impact factor: 5.699

9.  Mapping the Chloroplast DNA of Vicia faba.

Authors:  K Ko; N A Straus; J P Williams
Journal:  Curr Genet       Date:  1983-07       Impact factor: 3.886

10.  In vitro expression and characterization of the translation start site of the psbA gene product (QB protein) from higher plants.

Authors:  B N Cohen; T A Coleman; J J Schmitt; H Weissbach
Journal:  Nucleic Acids Res       Date:  1984-08-10       Impact factor: 16.971

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