Literature DB >> 6251082

The pH and temperature dependence of the activity of the high Km cyclic nucleotide phosphodiesterase of bakers' yeast.

J Londesborough, T M Lukkari.   

Abstract

The hydrolysis of adenosine 3':5'-monophosphate by the high Km cyclic nucleotide phosphodiesterase of bakers' yeast was studied over a range of temperature and pH at I = 0.17. The effects of ionic strength and MgCl2 concentration were studied at pH 7.7 and 30 degrees C. Km and Vmax were insensitive to changes in the MgCl2 concentration between 1 and 30 mM, implying that this enzyme (which does not require free divalent metal ions) does not discriminate between free cyclic AMP- and the Mg-cyclic AMP+ complex. Vmax decreased below pH 6.8 because of protonation of a group required in the basic form in the enzyme x substrate complex. On the basis of its pK (5.46 at 30 degrees C) and delta H (23 kJ/mol) this group was tentatively identified as imidazole. Vmax/Km decreased above pH 6.8 because of ionization of a group required in the acid form in the free enzyme, with a pK of 7.88 at 30 degrees C and a delta H of about 13 kJ/mol. Several possibilities exist for the identity of this group, the most likely being a second imidazole, sulfhydryl, or a water molecule bonded to tightly bound zinc. At pH 7.90, log Vmax and log Km both changed linearly with 1/T (between 12 degrees C and 37 degrees C) with enthalpies of 47 and 55 kJ/mol, respectively. Consequently, at low enough cyclic AMP concentration, the rate of reaction at pH 7.90 decreases slightly when the temperature is increased. This is also true at higher pH, but in the physiological pH range (6.4 to 7.5) Vmax/Km and, therefore, the rate of reaction at very low cyclic AMP concentration were nearly independent of temperature. Under physiological conditions, the Km approaches the upper limit of in vivo cyclic AMP concentrations in yeast, and at normal in vivo cyclic AMP concentrations the pH optimum is within or below the physiological range of pH in yeast.

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Year:  1980        PMID: 6251082

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  9 in total

1.  Adenosine 3',5'-phosphate phosphodiesterase and pheromone response in the yeast Saccharomyces cerevisiae.

Authors:  H H Liao; J Thorner
Journal:  J Bacteriol       Date:  1981-12       Impact factor: 3.490

2.  Low Km cyclic AMP phosphodiesterase of yeast may be bound to ribosomes associated with the nucleus.

Authors:  J Londesborough; L Jönkkäri
Journal:  Mol Cell Biochem       Date:  1982-07-23       Impact factor: 3.396

3.  Enzymatic and mutational analyses of a class II 3',5'-cyclic nucleotide phosphodiesterase, PdeE, from Myxococcus xanthus.

Authors:  Yoshio Kimura; Masaaki Yoshimi; Goro Takata
Journal:  J Bacteriol       Date:  2011-02-11       Impact factor: 3.490

4.  Development of a Comprehensive Genotype-to-Fitness Map of Adaptation-Driving Mutations in Yeast.

Authors:  Sandeep Venkataram; Barbara Dunn; Yuping Li; Atish Agarwala; Jessica Chang; Emily R Ebel; Kerry Geiler-Samerotte; Lucas Hérissant; Jamie R Blundell; Sasha F Levy; Daniel S Fisher; Gavin Sherlock; Dmitri A Petrov
Journal:  Cell       Date:  2016-09-01       Impact factor: 41.582

5.  The PDE1-encoded low-affinity phosphodiesterase in the yeast Saccharomyces cerevisiae has a specific function in controlling agonist-induced cAMP signaling.

Authors:  P Ma; S Wera; P Van Dijck; J M Thevelein
Journal:  Mol Biol Cell       Date:  1999-01       Impact factor: 4.138

6.  A stereochemical investigation of the hydrolysis of cyclic AMP and the (Sp)-and (Rp)-diastereoisomers of adenosine cyclic 3':5'-phosphorothioate by bovine heart and baker's-yeast cyclic AMP phosphodiesterases.

Authors:  R L Jarvest; G Lowe; J Baraniak; W J Stec
Journal:  Biochem J       Date:  1982-05-01       Impact factor: 3.857

Review 7.  The RAS-adenylate cyclase pathway and cell cycle control in Saccharomyces cerevisiae.

Authors:  J M Thevelein
Journal:  Antonie Van Leeuwenhoek       Date:  1992-08       Impact factor: 2.271

8.  Crystal Structures of Candida albicans Phosphodiesterase 2 and Implications for Its Biological Functions.

Authors:  Ting Yao; Yiyou Huang; Meng Zhang; Yujuan Chen; Hairun Pei; Jianyou Shi; Huanchen Wang; Yousheng Wang; Hengming Ke
Journal:  Biochemistry       Date:  2018-10-04       Impact factor: 3.321

9.  Dual specificity and novel structural folding of yeast phosphodiesterase-1 for hydrolysis of second messengers cyclic adenosine and guanosine 3',5'-monophosphate.

Authors:  Yuanyuan Tian; Wenjun Cui; Manna Huang; Howard Robinson; Yiqian Wan; Yousheng Wang; Hengming Ke
Journal:  Biochemistry       Date:  2014-07-22       Impact factor: 3.162

  9 in total

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