Literature DB >> 6244210

Alteration of the specificity of restriction endonucleases in the presence of organic solvents.

E Malyguine, P Vannier, P Yot.   

Abstract

The specificity of XbaI, SalI, HhaI, PstI, BamHI and SstI is relaxed in the presence of an organic solvent, such as 20% glycerol or 8% dimethylsulfoxide (DMSO). This alteration, very pronounced in some cases, requires an excess of enzyme, varies from one kind of enzyme to another and is highly dependent on the pH, the ionic strength, the nature of the metallic cofactor and/or the presence of a second organic solvent. Preliminary data concerning XbaI and BamHI used under conditions where the relaxation of specificity is moderate, suggest that some of the new ("pseudo") sites correspond to shortened sequences derived from the normal recognition sequence cleaved under the standard conditions of the reaction.

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Year:  1980        PMID: 6244210     DOI: 10.1016/0378-1119(80)90035-9

Source DB:  PubMed          Journal:  Gene        ISSN: 0378-1119            Impact factor:   3.688


  19 in total

1.  Differences between EcoRI nonspecific and "star" sequence complexes revealed by osmotic stress.

Authors:  Nina Y Sidorova; Donald C Rau
Journal:  Biophys J       Date:  2004-10       Impact factor: 4.033

2.  Alteration of the specificity of PvuII restriction endonuclease.

Authors:  M Nasri; D Thomas
Journal:  Nucleic Acids Res       Date:  1987-10-12       Impact factor: 16.971

3.  Structural adaptations in the interaction of EcoRI endonuclease with methylated GAATTC sites.

Authors:  L Jen-Jacobson; L E Engler; D R Lesser; M R Kurpiewski; C Yee; B McVerry
Journal:  EMBO J       Date:  1996-06-03       Impact factor: 11.598

4.  Rearrangement, amplification, and assortment of mitochondrial DNA molecules in cultured cells of Brassica campestris.

Authors:  M Shirzadegan; M Christey; E D Earle; J D Palmer
Journal:  Theor Appl Genet       Date:  1989-01       Impact factor: 5.699

5.  'Star' activity and complete loss of specificity of CeqI endonuclease.

Authors:  Z Izsvák; E Duda
Journal:  Biochem J       Date:  1989-02-15       Impact factor: 3.857

6.  Relaxation of recognition sequence of specific endonuclease HindIII.

Authors:  M Nasri; D Thomas
Journal:  Nucleic Acids Res       Date:  1986-01-24       Impact factor: 16.971

Review 7.  Type II restriction endonucleases--a historical perspective and more.

Authors:  Alfred Pingoud; Geoffrey G Wilson; Wolfgang Wende
Journal:  Nucleic Acids Res       Date:  2014-05-30       Impact factor: 16.971

8.  Heterogeneity in molecular recognition by restriction endonucleases: osmotic and hydrostatic pressure effects on BamHI, Pvu II, and EcoRV specificity.

Authors:  C R Robinson; S G Sligar
Journal:  Proc Natl Acad Sci U S A       Date:  1995-04-11       Impact factor: 11.205

9.  Activation of carbamoyl phosphate synthetase by cryoprotectants.

Authors:  V Rubio; H G Britton; S Grisolía
Journal:  Mol Cell Biochem       Date:  1983       Impact factor: 3.396

10.  Sequence-specific endonuclease BamHI: relaxation of sequence recognition.

Authors:  J George; J G Chirikjian
Journal:  Proc Natl Acad Sci U S A       Date:  1982-04       Impact factor: 11.205

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