Literature DB >> 6210880

A comparison of experimental and theoretical melting maps for replicative form of phi X174 DNA.

V I Lyamichev, A S Borovik.   

Abstract

A previously elaborated technique for fixing a chosen partially melted state of DNA with glyoxal was used in a study of the melting process of the replicative form (RF III) of phi X174 DNA. Electron-microscopic maps corresponding to five points of the melting curve of RF III were obtained and compared with the theoretical melting maps obtained in (4) and (6). This comparison clearly shows that only rigorous calculations (4) and not the ones proposed by Azbel (6,7) correctly predict the course of RF III melting.

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Year:  1982        PMID： 6210880      PMCID： PMC320577          DOI： 10.1093/nar/10.6.1867

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN： 0305-1048            Impact factor:   16.971


  9 in total

1.  Correlation of local stability of DNA during melting with environmental conditions.

Authors:  J Gabbarro-Arpa; P Tougard; C Reiss
Journal:  Nature       Date:  1979-08-09       Impact factor: 49.962

2.  Nucleotide sequence of bacteriophage phi X174 DNA.

Authors:  F Sanger; G M Air; B G Barrell; N L Brown; A R Coulson; C A Fiddes; C A Hutchison; P M Slocombe; M Smith
Journal:  Nature       Date:  1977-02-24       Impact factor: 49.962

3.  DNA sequencing and melting curve.

Authors:  M Y Azbel
Journal:  Proc Natl Acad Sci U S A       Date:  1979-01       Impact factor: 11.205

4.  Equilibrium melting of plasmid ColE1 DNA: electron-microscopic visualization.

Authors:  A S Borovik; Y A Kalambet; Y L Lyubchenko; V T Shitov; E I Golovanov
Journal:  Nucleic Acids Res       Date:  1980-09-25       Impact factor: 16.971

Review 5.  Fine structure in the thermal denaturation of DNA: high temperature-resolution spectrophotometric studies.

Authors:  A Wada; S Yabuki; Y Husimi
Journal:  CRC Crit Rev Biochem       Date:  1980

6.  Theoretical melting profiles and denaturation maps of DNA with known sequence: fdDNA.

Authors:  A V Vologodskii; M D Frank-Kamenetskii
Journal:  Nucleic Acids Res       Date:  1978-07       Impact factor: 16.971

7.  Direct comparison of theoretical and experimental melting profiles for RF II phiX174 DNA.

Authors:  Y L Lyubchenko; A V Vologodskii; M D Frank-Kamenetskii
Journal:  Nature       Date:  1978-01-05       Impact factor: 49.962

8.  DNA sequencing and helix-coil transition. III. DNA sequencing.

Authors:  M Y Azbel
Journal:  Biopolymers       Date:  1980-01       Impact factor: 2.505

9.  Theory of DNA melting curves.

Authors:  M Fixman; J J Freire
Journal:  Biopolymers       Date:  1977-12       Impact factor: 2.505
  9 in total
  3 in total

1.  DNA overstretching in the presence of glyoxal: structural evidence of force-induced DNA melting.

Authors:  Leila Shokri; Micah J McCauley; Ioulia Rouzina; Mark C Williams
Journal:  Biophys J       Date:  2008-04-18       Impact factor: 4.033

Review 2.  Imaging of DNA and Protein-DNA Complexes with Atomic Force Microscopy.

Authors:  Yuri L Lyubchenko; Luda S Shlyakhtenko
Journal:  Crit Rev Eukaryot Gene Expr       Date:  2016       Impact factor: 1.807

3.  Mechanisms of small molecule-DNA interactions probed by single-molecule force spectroscopy.

Authors:  Ali A Almaqwashi; Thayaparan Paramanathan; Ioulia Rouzina; Mark C Williams
Journal:  Nucleic Acids Res       Date:  2016-04-16       Impact factor: 16.971
  3 in total

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