Literature DB >> 6187001

Decay of mRNA in Escherichia coli: investigation of the fate of specific segments of transcripts.

A von Gabain, J G Belasco, J L Schottel, A C Chang, S N Cohen.   

Abstract

An assay was developed to investigate the fate of specific segments of beta-lactamase (bla) and ompA gene transcripts in Escherichia coli. DNA probes cloned in bacteriophage M13 were treated with an endonuclease capable of cleaving single-stranded DNA, the fragments produced were annealed with total cellular RNA, and the resulting RNA . DNA hybrids were subjected to S1 nuclease treatment and gel fractionation. By using this assay, direct evidence was obtained for 3'-to-5' directionality in the decay of the long-lived mRNA encoded by the ompA gene, and no preferential stability was observed for translated versus untranslated mRNA segments. In the case of bla mRNA, initial cleavage of the full-length transcript was rate limiting, and no decay intermediates were detected. No difference in degradation rate was seen for bla transcripts having variant 3' or 5' termini.

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Year:  1983        PMID: 6187001      PMCID: PMC393437          DOI: 10.1073/pnas.80.3.653

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  24 in total

1.  Sedimentation characteristics of rapidly labelled RNA from HeLa cells.

Authors:  K SCHERRER; J E DARNELL
Journal:  Biochem Biophys Res Commun       Date:  1962-06-04       Impact factor: 3.575

2.  Evidence for endonucleolytic attack in decay of lac messenger RNA in Escherichia coli.

Authors:  M Blundell; D Kennell
Journal:  J Mol Biol       Date:  1974-02-25       Impact factor: 5.469

3.  RNA chain growth rates in Escherichia coli.

Authors:  H Manor; D Goodman; G S Stent
Journal:  J Mol Biol       Date:  1969-01-14       Impact factor: 5.469

4.  Polarity and the degradation of mRNA.

Authors:  D E Morse; C Yanofsky
Journal:  Nature       Date:  1969-10-25       Impact factor: 49.962

5.  Degradation of tryptophan messenger. On the degradation of messenger RNA for the tryptophan operon in Escherichia coli.

Authors:  N Morikawa; F Imamoto
Journal:  Nature       Date:  1969-07-05       Impact factor: 49.962

6.  Direction of in vivo degradation of tryptophan messenger RNA--a correction.

Authors:  D E Morse; R Mosteller; R F Baker; C Yanofsky
Journal:  Nature       Date:  1969-07-05       Impact factor: 49.962

7.  Precise location of two promoters for the beta-lactamase gene of pBR322. S1 mapping of ribonucleic acid isolated from Escherichia coli or synthesized in vitro.

Authors:  J Brosius; R L Cate; A P Perlmutter
Journal:  J Biol Chem       Date:  1982-08-10       Impact factor: 5.157

8.  Diazotizable arylamine cellulose papers for the coupling and hybridization of nucleic acids.

Authors:  B Seed
Journal:  Nucleic Acids Res       Date:  1982-03-11       Impact factor: 16.971

9.  Organization of transcriptional signals in plasmids pBR322 and pACYC184.

Authors:  D Stüber; H Bujard
Journal:  Proc Natl Acad Sci U S A       Date:  1981-01       Impact factor: 11.205

10.  Posttranscriptional control of bacteriophage lambda gene expression from a site distal to the gene.

Authors:  G Guarneros; C Montañez; T Hernandez; D Court
Journal:  Proc Natl Acad Sci U S A       Date:  1982-01       Impact factor: 11.205

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  197 in total

1.  Transcript cleavage, attenuation, and an internal promoter in the Rhodobacter capsulatus puc operon.

Authors:  H LeBlanc; A S Lang; J T Beatty
Journal:  J Bacteriol       Date:  1999-08       Impact factor: 3.490

2.  Unpaired terminal nucleotides and 5' monophosphorylation govern 3' polyadenylation by Escherichia coli poly(A) polymerase I.

Authors:  Y Feng; S N Cohen
Journal:  Proc Natl Acad Sci U S A       Date:  2000-06-06       Impact factor: 11.205

3.  The overlapping angB and angG genes are encoded within the trans-acting factor region of the virulence plasmid in Vibrio anguillarum: essential role in siderophore biosynthesis.

Authors:  T J Welch; S Chai; J H Crosa
Journal:  J Bacteriol       Date:  2000-12       Impact factor: 3.490

4.  Characterization of mutations in the metY-nusA-infB operon that suppress the slow growth of a DeltarimM mutant.

Authors:  G O Bylund; J M Lövgren; P M Wikström
Journal:  J Bacteriol       Date:  2001-10       Impact factor: 3.490

Review 5.  Genetics and assembly line enzymology of siderophore biosynthesis in bacteria.

Authors:  Jorge H Crosa; Christopher T Walsh
Journal:  Microbiol Mol Biol Rev       Date:  2002-06       Impact factor: 11.056

6.  Integration of a complex regulatory cascade involving the SirA/BarA and Csr global regulatory systems that controls expression of the Salmonella SPI-1 and SPI-2 virulence regulons through HilD.

Authors:  Luary C Martínez; Helen Yakhnin; Martha I Camacho; Dimitris Georgellis; Paul Babitzke; José L Puente; Víctor H Bustamante
Journal:  Mol Microbiol       Date:  2011-05-12       Impact factor: 3.501

7.  Factors affecting start site selection at the Escherichia coli fis promoter.

Authors:  Kimberly A Walker; Robert Osuna
Journal:  J Bacteriol       Date:  2002-09       Impact factor: 3.490

8.  Transcriptional analysis of the sfa determinant revealing mmRNA processing events in the biogenesis of S fimbriae in pathogenic Escherichia coli.

Authors:  Carlos Balsalobre; Joachim Morschhäuser; Jana Jass; Jörg Hacker; Bernt Eric Uhlin
Journal:  J Bacteriol       Date:  2003-01       Impact factor: 3.490

9.  Transcription of single-copy hybrid lacZ genes by T7 RNA polymerase in Escherichia coli: mRNA synthesis and degradation can be uncoupled from translation.

Authors:  M Chevrier-Miller; N Jacques; O Raibaud; M Dreyfus
Journal:  Nucleic Acids Res       Date:  1990-10-11       Impact factor: 16.971

10.  The ail gene of Yersinia enterocolitica has a role in the ability of the organism to survive serum killing.

Authors:  D E Pierson; S Falkow
Journal:  Infect Immun       Date:  1993-05       Impact factor: 3.441

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