Literature DB >> 6186991

Accurate and efficient in vitro splicing of purified precursor RNAs specified by early region 2 of the adenovirus 2 genome.

C J Goldenberg, S D Hauser.   

Abstract

Polyadenylated and deproteinized nuclear RNA precursors encoded by early region 2 of the adenovirus 2 genome are spliced in vitro by nuclear extracts prepared from MOPC-315 mouse myeloma cells. The in vitro reaction excises sequences from two introns and attaches 5' sequences to the mRNA body. The nucleotide sequence across the splice junctions in the E2 RNAs processed in vitro was investigated by performing primer extensions in the presence of dideoxynucleotides and direct sequencing on polyacrylamide gels. We conclude that the in vitro splicing reaction is accurate and has the same precision as that of in vivo E2 cytoplasmic mRNA prepared from Ad2 infected cells. The efficiency of in vitro splicing by the nuclear extracts is very high. Approximately 80% of E2 RNA precursor, on a molar basis, are spliced in vitro to a mature RNA. These findings provide evidence that a nuclear extract prepared from MOPC-315 mouse myeloma cells is capable of accurate and efficient splicing of E2 RNA precursors.

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Year:  1983        PMID: 6186991      PMCID: PMC325800          DOI: 10.1093/nar/11.5.1337

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  38 in total

1.  Hybridization of denatured RNA and small DNA fragments transferred to nitrocellulose.

Authors:  P S Thomas
Journal:  Proc Natl Acad Sci U S A       Date:  1980-09       Impact factor: 11.205

2.  Determination of RNA sequences by primer directed synthesis and sequencing of their cDNA transcripts.

Authors:  P K Ghosh; V B Reddy; M Piatak; P Lebowitz; S M Weissman
Journal:  Methods Enzymol       Date:  1980       Impact factor: 1.600

Review 3.  Organization and expression of eucaryotic split genes coding for proteins.

Authors:  R Breathnach; P Chambon
Journal:  Annu Rev Biochem       Date:  1981       Impact factor: 23.643

4.  Sequencing end-labeled DNA with base-specific chemical cleavages.

Authors:  A M Maxam; W Gilbert
Journal:  Methods Enzymol       Date:  1980       Impact factor: 1.600

5.  A small nuclear ribonucleoprotein is required for splicing of adenoviral early RNA sequences.

Authors:  V W Yang; M R Lerner; J A Steitz; S J Flint
Journal:  Proc Natl Acad Sci U S A       Date:  1981-03       Impact factor: 11.205

6.  Transcription and processing of adenoviral RNA by extracts from HeLa cells.

Authors:  B Weingärtner; W Keller
Journal:  Proc Natl Acad Sci U S A       Date:  1981-07       Impact factor: 11.205

7.  DNA-dependent transcription of adenovirus genes in a soluble whole-cell extract.

Authors:  J L Manley; A Fire; A Cano; P A Sharp; M L Gefter
Journal:  Proc Natl Acad Sci U S A       Date:  1980-07       Impact factor: 11.205

8.  The structure of adenovirus 2 early nuclear and cytoplasmic RNAs.

Authors:  G R Kitchingman; H Westphal
Journal:  J Mol Biol       Date:  1980-02-15       Impact factor: 5.469

9.  Speculations on RNA splicing.

Authors:  P A Sharp
Journal:  Cell       Date:  1981-03       Impact factor: 41.582

10.  Transcription of Simian virus 40 DNA in a HeLa whole cell extract.

Authors:  H Handa; R J Kaufman; J Manley; M Gefter; P A Sharp
Journal:  J Biol Chem       Date:  1981-01-10       Impact factor: 5.157

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  20 in total

1.  Proteolysis of splicing factors during rat and monkey cell fractionation.

Authors:  H La Branche; D Frappier; B Chabot
Journal:  Nucleic Acids Res       Date:  1991-08-25       Impact factor: 16.971

2.  Structure and expression of the Euglena gracilis nuclear gene coding for the translation elongation factor EF-1 alpha.

Authors:  P E Montandon; E Stutz
Journal:  Nucleic Acids Res       Date:  1990-01-11       Impact factor: 16.971

3.  Euglena gracilis chloroplast DNA: the untranslated leader of tufA-ORF206 gene contains an intron.

Authors:  P E Montandon; C Knuchel-Aegerter; E Stutz
Journal:  Nucleic Acids Res       Date:  1987-10-12       Impact factor: 16.971

4.  Preferential excision of the 5' proximal intron from mRNA precursors with two introns as mediated by the cap structure.

Authors:  M Ohno; H Sakamoto; Y Shimura
Journal:  Proc Natl Acad Sci U S A       Date:  1987-08       Impact factor: 11.205

5.  The dependence of splicing efficiency on the length of 3' exon.

Authors:  A D Turnbull-Ross; A J Else; I C Eperon
Journal:  Nucleic Acids Res       Date:  1988-01-25       Impact factor: 16.971

6.  Multiple interactions between the splicing substrate and small nuclear ribonucleoproteins in spliceosomes.

Authors:  B Chabot; J A Steitz
Journal:  Mol Cell Biol       Date:  1987-01       Impact factor: 4.272

7.  Assembly in an in vitro splicing reaction of a mouse insulin messenger RNA precursor into a 60-40S ribonucleoprotein complex.

Authors:  G Kaltwasser; S G Spitzer; C J Goldenberg
Journal:  Nucleic Acids Res       Date:  1986-05-12       Impact factor: 16.971

8.  Cap-dependent RNA splicing in a HeLa nuclear extract.

Authors:  I Edery; N Sonenberg
Journal:  Proc Natl Acad Sci U S A       Date:  1985-11       Impact factor: 11.205

9.  Efficient coupled transcription and mRNA splicing in vitro using plasmids derived from early region 3 of adenovirus 2 and a nondefective adenovirus-simian virus 40 hybrid.

Authors:  S Pawar; C M Ahmed; R Watkins; S Zain
Journal:  Proc Natl Acad Sci U S A       Date:  1984-05       Impact factor: 11.205

10.  Isolation and characterization of the RNA2, RNA3, and RNA11 genes of Saccharomyces cerevisiae.

Authors:  R L Last; J B Stavenhagen; J L Woolford
Journal:  Mol Cell Biol       Date:  1984-11       Impact factor: 4.272

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