Literature DB >> 6149120

Tissue-specific DNaseI hypersensitive sites in the 5'-flanking sequences of the tryptophan oxygenase and the tyrosine aminotransferase genes.

P Becker, R Renkawitz, G Schütz.   

Abstract

The genes for tryptophan oxygenase (TO) and tyrosine aminotransferase (TAT) are expressed in a tissue- and development-specific manner and are regulated by glucocorticoids (TO and TAT) and glucagon or its intracellular mediator cAMP (TAT) in rat liver. We have analyzed the chromatin structure of these genes in the vicinity of the 5' ends with regard to DNaseI hypersensitivity and have found DNaseI hypersensitive sites upstream of each of the promoters. Mapping of this region reveals three closely spaced cleavage sites near the TO promoter and a doublet of sites near the TAT promoter. In both genes additional cleavage sites are found further upstream. All hypersensitive sites of both genes are absent in kidney nuclei and therefore appear to be specific for the tissue expressing the genes. A correlation of expression and modified chromatin structure was also observed in a hepatoma cell line expressing TAT but not TO: hypersensitive sites are present in TAT but not in TO chromatin. Upon glucocorticoid induction an additional hypersensitive site is detected approximately 2 kb upstream of the TAT promoter in liver and hepatoma cells.

Entities:  

Mesh:

Substances:

Year:  1984        PMID: 6149120      PMCID: PMC557636          DOI: 10.1002/j.1460-2075.1984.tb02084.x

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  26 in total

1.  Chromosomal subunits in active genes have an altered conformation.

Authors:  H Weintraub; M Groudine
Journal:  Science       Date:  1976-09-03       Impact factor: 47.728

Review 2.  Genetic control of morphogenetic and biochemical differentiation: lethal albino deletions in the mouse.

Authors:  S Gluecksohn-Waelsch
Journal:  Cell       Date:  1979-02       Impact factor: 41.582

3.  Efficient transfer of large DNA fragments from agarose gels to diazobenzyloxymethyl-paper and rapid hybridization by using dextran sulfate.

Authors:  G M Wahl; M Stern; G R Stark
Journal:  Proc Natl Acad Sci U S A       Date:  1979-08       Impact factor: 11.205

4.  Further evidence for posttranscriptional control of inducible tyrosine aminotransferase synthesis in cultured hepatoma cells.

Authors:  G M Tomkins; B B Levinson; J D Baxter; L Dethlefsen
Journal:  Nat New Biol       Date:  1972-09-06

Review 5.  Active chromatin.

Authors:  S Weisbrod
Journal:  Nature       Date:  1982-05-27       Impact factor: 49.962

6.  A 200 base pair region at the 5' end of the chicken adult beta-globin gene is accessible to nuclease digestion.

Authors:  J D McGhee; W I Wood; M Dolan; J D Engel; G Felsenfeld
Journal:  Cell       Date:  1981-11       Impact factor: 41.582

Review 7.  Chromatin.

Authors:  T Igo-Kemenes; W Hörz; H G Zachau
Journal:  Annu Rev Biochem       Date:  1982       Impact factor: 23.643

8.  Non-random cleavage of SV40 DNA in the compact minichromosome and free in solution by micrococcal nuclease.

Authors:  S A Nedospasov; G P Georgiev
Journal:  Biochem Biophys Res Commun       Date:  1980-01-29       Impact factor: 3.575

9.  Regulation of tyrosine alpha-ketoglutarate transaminase in rat liver. VI. Induction by pancreatic hormones.

Authors:  D Holten; F T Kenney
Journal:  J Biol Chem       Date:  1967-10-10       Impact factor: 5.157

10.  Pretranslational control of tryptophan oxygenase levels in Morris hepatoma and host liver.

Authors:  L Ramanarayanan-Murthy; P D Colman; H P Morris; P Feigelson
Journal:  Cancer Res       Date:  1976-10       Impact factor: 12.701

View more
  50 in total

1.  Nutritional regulation of nucleosomal structure at the chicken malic enzyme promoter in liver.

Authors:  X J Ma; A G Goodridge
Journal:  Nucleic Acids Res       Date:  1992-10-11       Impact factor: 16.971

2.  Retinoid-induced chromatin structure alterations in the retinoic acid receptor beta2 promoter.

Authors:  N Bhattacharyya; A Dey; S Minucci; A Zimmer; S John; G Hager; K Ozato
Journal:  Mol Cell Biol       Date:  1997-11       Impact factor: 4.272

3.  A simpler and better method to cleave chromatin with DNase 1 for hypersensitive site analyses.

Authors:  A F Stewart; A Reik; G Schütz
Journal:  Nucleic Acids Res       Date:  1991-06-11       Impact factor: 16.971

4.  Cell-type specific activity of two glucocorticoid responsive units of rat tyrosine aminotransferase gene is associated with multiple binding sites for C/EBP and a novel liver-specific nuclear factor.

Authors:  T Grange; J Roux; G Rigaud; R Pictet
Journal:  Nucleic Acids Res       Date:  1991-01-11       Impact factor: 16.971

5.  Glucocorticoid receptor DNA-binding specificity is increased by the organization of DNA in nucleosomes.

Authors:  T Perlmann
Journal:  Proc Natl Acad Sci U S A       Date:  1992-05-01       Impact factor: 11.205

6.  Regulation of tyrosine aminotransferase gene expression by glucocorticoids in quiescent and regenerating liver.

Authors:  L Baki; M N Alexis
Journal:  Biochem J       Date:  1996-12-15       Impact factor: 3.857

Review 7.  Transcription factor access to chromatin.

Authors:  M Beato; K Eisfeld
Journal:  Nucleic Acids Res       Date:  1997-09-15       Impact factor: 16.971

8.  Two remote glucocorticoid responsive units interact cooperatively to promote glucocorticoid induction of rat tyrosine aminotransferase gene expression.

Authors:  T Grange; J Roux; G Rigaud; R Pictet
Journal:  Nucleic Acids Res       Date:  1989-11-11       Impact factor: 16.971

9.  Ligand-dependent occupancy of the retinoic acid receptor beta 2 promoter in vivo.

Authors:  A Dey; S Minucci; K Ozato
Journal:  Mol Cell Biol       Date:  1994-12       Impact factor: 4.272

10.  Expression of glutathione S-transferase during rat liver development.

Authors:  L B Tee; K S Gilmore; D J Meyer; B Ketterer; Y Vandenberghe; G C Yeoh
Journal:  Biochem J       Date:  1992-02-15       Impact factor: 3.857

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.