Literature DB >> 6115422

Structural dynamics of yeast hexokinase during catalysis.

T A Steitz, M Shoham, W S Bennett.   

Abstract

The binding of the substrate glucose to yeast hexokinase results in a substantial enzyme conformational change that is essential for catalysis and may be important for the enzyme's specificity, as well as the control of its activity. From high-resolution crystal structures of the monomeric enzyme crystallized both in the presence and in the absence of glucose, we find that glucose binds into the deep cleft that separates the molecule into two lobes and causes these two lobes to move together and close off the cleft. The structure of the hexokinase crystallized in the presence of xylose and ADP is being determined at low resolution. In this crystal form, the enzyme was thought to be in the conformation of the ternary complex. However, a low-resolution structure of this crystal form shows clearly that the enzyme is in the 'open' form and is not a ternary complex. Crystals of the A isozyme with glucose and ADP may be. Further, chemically sequenced tryptic peptides are being incorporated into the model obtained by crystallographic refinement at 2.1 A resolution. Completion of the sequence and the structure of the ternary complex should allow a detailed description of the enzymatic mechanism of this kinase and the role of substrate-induced conformational changes in catalysis and control.

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Year:  1981        PMID: 6115422     DOI: 10.1098/rstb.1981.0058

Source DB:  PubMed          Journal:  Philos Trans R Soc Lond B Biol Sci        ISSN: 0962-8436            Impact factor:   6.237


  19 in total

1.  An ATPase domain common to prokaryotic cell cycle proteins, sugar kinases, actin, and hsp70 heat shock proteins.

Authors:  P Bork; C Sander; A Valencia
Journal:  Proc Natl Acad Sci U S A       Date:  1992-08-15       Impact factor: 11.205

2.  Yet another "active" pseudokinase, Erb3.

Authors:  Susan S Taylor; Alexandr P Kornev
Journal:  Proc Natl Acad Sci U S A       Date:  2010-04-26       Impact factor: 11.205

3.  Conformational itinerary of Pseudomonas aeruginosa 1,6-anhydro-N-acetylmuramic acid kinase during its catalytic cycle.

Authors:  John-Paul Bacik; Marjan Tavassoli; Trushar R Patel; Sean A McKenna; David J Vocadlo; Mazdak Khajehpour; Brian L Mark
Journal:  J Biol Chem       Date:  2013-12-20       Impact factor: 5.157

Review 4.  On the beneficent thickness of water.

Authors:  E Branscomb; M J Russell
Journal:  Interface Focus       Date:  2019-10-18       Impact factor: 3.906

Review 5.  Cotransport of salt and water in membrane proteins: membrane proteins as osmotic engines.

Authors:  T Zeuthen; W D Stein
Journal:  J Membr Biol       Date:  1994-02       Impact factor: 1.843

6.  Determination of the distribution of catalyst activity across a permeable membrane containing an immobilized enzyme. Indeterminacy of a functional approach to a structural problem.

Authors:  B Bunow; S R Caplan
Journal:  Biophys J       Date:  1984-06       Impact factor: 4.033

7.  Insights into mechanism of glucokinase activation: observation of multiple distinct protein conformations.

Authors:  Shenping Liu; Mark J Ammirati; Xi Song; John D Knafels; Jeff Zhang; Samantha E Greasley; Jeffrey A Pfefferkorn; Xiayang Qiu
Journal:  J Biol Chem       Date:  2012-02-01       Impact factor: 5.157

8.  Inactivation of yeast hexokinase by Cibacron Blue 3G-A: spectral, kinetic and structural investigations.

Authors:  R N Puri; R Roskoski
Journal:  Biochem J       Date:  1994-05-15       Impact factor: 3.857

9.  A change in actin conformation associated with filament instability after Pi release.

Authors:  L D Belmont; A Orlova; D G Drubin; E H Egelman
Journal:  Proc Natl Acad Sci U S A       Date:  1999-01-05       Impact factor: 11.205

10.  Crystal structures of Escherichia coli ATP-dependent glucokinase and its complex with glucose.

Authors:  Vladimir V Lunin; Yunge Li; Joseph D Schrag; Pietro Iannuzzi; Miroslaw Cygler; Allan Matte
Journal:  J Bacteriol       Date:  2004-10       Impact factor: 3.490

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