Literature DB >> 6089735

A case of spurious product formation during attempted resynthesis of proteins by reverse proteolysis. Some batches of 'pure' glycerol contain cross-linking agents.

A E Proudfoot, R E Offord, K Rose, M Schmidt, C J Wallace.   

Abstract

In cases where enzyme-catalysed synthesis of a peptide bond is being used to re-form a protein from two large peptide fragments, the organic co-solvent chosen has so far been glycerol, for most solvents in use in small-molecule systems are potent protein denaturants. We have found, however, that impurities contaminating certain batches of glycerol are effective in cross-linking the complexes formed by these peptide fragments, thus mimicking the enzyme-catalysed process. In one such case, the reported re-formation of cytochrome c from a two-fragment complex system, cytochrome c-T, the extent and rate of conjugate formation duplicates that reported for enzymic resynthesis. We observed no difference between mixtures containing or lacking enzyme. We warn of the danger of confusion possible to those engaged in studies of resynthesis, and suggest a simple control of purchased glycerol to avoid it. We recommend similar caution to those (X-ray crystallographers and others) who seek to stabilize protein solutions by adding large quantities of glycerol.

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Year:  1984        PMID: 6089735      PMCID: PMC1144043          DOI: 10.1042/bj2210325

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  21 in total

1.  The reversible removal of cytochrome c from mitochondria.

Authors:  E E JACOBS; D R SANADI
Journal:  J Biol Chem       Date:  1960-02       Impact factor: 5.157

2.  A functioning complex between tryptic fragments of cytochrome c. A route to the production of semisynthetic analogues.

Authors:  D E Harris; R E Offord
Journal:  Biochem J       Date:  1977-01-01       Impact factor: 3.857

3.  Synthesis of peptide bonds by proteinases. Addition of organic cosolvents shifts peptide bond equilibria toward synthesis.

Authors:  G A Homandberg; J A Mattis; M Laskowski
Journal:  Biochemistry       Date:  1978-11-28       Impact factor: 3.162

4.  Enzymatic resynthesis of the hydrolyzed peptide bond(s) in ribonuclease S.

Authors:  G A Homandberg; M Laskowski
Journal:  Biochemistry       Date:  1979-02-20       Impact factor: 3.162

5.  Spontaneous re-formation of a broken peptide chain.

Authors:  D F Dyckes; T Creighton; R C Sheppard
Journal:  Nature       Date:  1974-01-25       Impact factor: 49.962

6.  Reconstitution of horse heart cytochrome c: reformation of the peptide bond linking residues 65 and 66.

Authors:  G Corradin; H A Harbury
Journal:  Biochem Biophys Res Commun       Date:  1974-12-23       Impact factor: 3.575

7.  The state of the tyrosines of bovine pancreatic ribonuclease in ethylene glycol and glycerol.

Authors:  J Bello
Journal:  Biochemistry       Date:  1969-11       Impact factor: 3.162

8.  Cleavage of structural proteins during the assembly of the head of bacteriophage T4.

Authors:  U K Laemmli
Journal:  Nature       Date:  1970-08-15       Impact factor: 49.962

9.  Solic phase synthetic study of the active site region of staphylococcal nuclease-T'.

Authors:  I M Chaiken; C B Anfinsen
Journal:  J Biol Chem       Date:  1971-04-10       Impact factor: 5.157

10.  Electrophoretic mobilities of peptides on paper and their use in the determination of amide groups.

Authors:  R E Offord
Journal:  Nature       Date:  1966-08-06       Impact factor: 49.962

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  6 in total

1.  Enzyme-assisted semisynthesis of polypeptide active esters and their use.

Authors:  K Rose; C Herrero; A E Proudfoot; R E Offord; C J Wallace
Journal:  Biochem J       Date:  1988-01-01       Impact factor: 3.857

2.  On the relationship between oxidation-reduction potential and biological activity in cytochrome c analogues. Results from four novel two-fragment complexes.

Authors:  C J Wallace; A E Proudfoot
Journal:  Biochem J       Date:  1987-08-01       Impact factor: 3.857

3.  A new non-covalent complex of semisynthetically modified tryptic fragments of cytochrome c.

Authors:  A E Proudfoot; C J Wallace; D E Harris; R E Offord
Journal:  Biochem J       Date:  1986-10-15       Impact factor: 3.857

4.  The oxidation-state-dependent ATP-binding site of cytochrome c. A possible physiological significance.

Authors:  B E Corthésy; C J Wallace
Journal:  Biochem J       Date:  1986-06-01       Impact factor: 3.857

5.  High-efficiency transpeptidation catalysed by clostripain and electrostatic effects in substrate specificity.

Authors:  S Yagisawa; S Watanabe; T Takaoka; H Azuma
Journal:  Biochem J       Date:  1990-03-15       Impact factor: 3.857

6.  Risk evaluation of impurities in topical excipients: The acetol case.

Authors:  Jente Boonen; Lieselotte Veryser; Lien Taevernier; Nathalie Roche; Kathelijne Peremans; Christian Burvenich; Bart De Spiegeleer
Journal:  J Pharm Anal       Date:  2014-01-08
  6 in total

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