Literature DB >> 6084720

Calibration of the angular dependence of the amide proton-C alpha proton coupling constants, 3JHN alpha, in a globular protein. Use of 3JHN alpha for identification of helical secondary structure.

A Pardi, M Billeter, K Wüthrich.   

Abstract

The vicinal amide proton-C alpha proton spin-spin coupling constants, JHN alpha, in the globular protein basic pancreatic trypsin inhibitor (BPTI) have been measured using phase-sensitive correlated spectroscopy at high digital resolution. In conjunction with the crystal structure of BPTI, these data were used to calibrate the correlation between 3JHN alpha and the dihedral angle phi. The resulting "BPTI curve" is 3JHN alpha = 6.4 cos2 theta - 1.4 cos theta + 1.9 (theta = [phi - 60 degrees]). It is further shown that measurement of the spin-spin couplings 3JHN alpha presents an independent, reliable method for identification of the location of helical structure in the amino acid sequence of proteins.

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Year:  1984        PMID: 6084720     DOI: 10.1016/0022-2836(84)90035-4

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  148 in total

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Journal:  Protein Sci       Date:  2000-05       Impact factor: 6.725

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4.  Protein-ligand interactions measured by 15N-filtered diffusion experiments.

Authors:  M L Tillett; M A Horsfield; L Y Lian; T J Norwood
Journal:  J Biomol NMR       Date:  1999-03       Impact factor: 2.835

5.  Role of backbone solvation and electrostatics in generating preferred peptide backbone conformations: distributions of phi.

Authors:  Franc Avbelj; Robert L Baldwin
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6.  Folding of a highly conserved diverging turn motif from the SH3 domain.

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Journal:  Biophys J       Date:  2003-03       Impact factor: 4.033

7.  Unblocked statistical-coil tetrapeptides in aqueous solution: quantum-chemical computation of the carbon-13 NMR chemical shifts.

Authors:  Jorge A Vila; Héctor A Baldoni; Daniel R Ripoll; Harold A Scheraga
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8.  Unblocked statistical-coil tetrapeptides and pentapeptides in aqueous solution: a theoretical study.

Authors:  Jorge A Vila; Daniel R Ripoll; Héctor A Baldoni; Harold A Scheraga
Journal:  J Biomol NMR       Date:  2002-11       Impact factor: 2.835

9.  Solution structure of the tachykinin peptide eledoisin.

Authors:  R Christy Rani Grace; Indu R Chandrashekar; Sudha M Cowsik
Journal:  Biophys J       Date:  2003-01       Impact factor: 4.033

10.  Proton NMR assignments of systemin.

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Journal:  J Protein Chem       Date:  1992-06
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