Literature DB >> 5572899

Molecular conformation of dihydrouridine: puckered base nucleoside of transfer RNA.

M Sundaralingam, S T Rao, J Abola.   

Abstract

The crystal structure of dihydrouridine hemihydrate has been determined by x-ray diffraction. Crystals of dihydrouridine contain two independent molecules in the asymmetric unit and a molecule of water. The x-ray structure determination has shown that the conformations of both molecules differ in important respects in the saturated base and the ribose. The molecular conformation of dihydrouridine has, for the first time, provided structural evidence that the rare nucleoside can proinote "loop" formation in the sugar-phosphate chain.

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Year:  1971        PMID: 5572899     DOI: 10.1126/science.172.3984.725

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  8 in total

1.  Crosslinking of the anticodon of P site bound tRNA to C-1400 of E.coli 16S RNA does not require the participation of the 50S subunit.

Authors:  R Denman; J Colgan; K Nurse; J Ofengand
Journal:  Nucleic Acids Res       Date:  1988-01-11       Impact factor: 16.971

2.  The conformation of polynucleotides with particular reference to transfer ribonucleic acids.

Authors:  F Cramer; W Saenger
Journal:  Biochem J       Date:  1971-12       Impact factor: 3.857

3.  Posttranscriptional modification of tRNA in psychrophilic bacteria.

Authors:  J J Dalluge; T Hamamoto; K Horikoshi; R Y Morita; K O Stetter; J A McCloskey
Journal:  J Bacteriol       Date:  1997-03       Impact factor: 3.490

Review 4.  The Dihydrouridine landscape from tRNA to mRNA: a perspective on synthesis, structural impact and function.

Authors:  Olivier Finet; Carlo Yague-Sanz; Florian Marchand; Damien Hermand
Journal:  RNA Biol       Date:  2022-01       Impact factor: 4.766

5.  Conformational flexibility in RNA: the role of dihydrouridine.

Authors:  J J Dalluge; T Hashizume; A E Sopchik; J A McCloskey; D R Davis
Journal:  Nucleic Acids Res       Date:  1996-03-15       Impact factor: 16.971

6.  An extended dsRBD is required for post-transcriptional modification in human tRNAs.

Authors:  Charles Bou-Nader; Ludovic Pecqueur; Damien Bregeon; Amina Kamah; Vincent Guérineau; Béatrice Golinelli-Pimpaneau; Beatriz G Guimarães; Marc Fontecave; Djemel Hamdane
Journal:  Nucleic Acids Res       Date:  2015-10-01       Impact factor: 16.971

Review 7.  The mammalian mitochondrial epitranscriptome.

Authors:  Pedro Rebelo-Guiomar; Christopher A Powell; Lindsey Van Haute; Michal Minczuk
Journal:  Biochim Biophys Acta Gene Regul Mech       Date:  2018-12-04       Impact factor: 4.490

8.  Identification of D Modification Sites Using a Random Forest Model Based on Nucleotide Chemical Properties.

Authors:  Huan Zhu; Chun-Yan Ao; Yi-Jie Ding; Hong-Xia Hao; Liang Yu
Journal:  Int J Mol Sci       Date:  2022-03-11       Impact factor: 5.923

  8 in total

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