Literature DB >> 5449454

The use of proflavin as an indicator in temperature-jump studies of the binding of a competitive inhibitor to trypsin.

F Guillain, D Thusius.   

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Year:  1970        PMID： 5449454     DOI： 10.1021/ja00721a051

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN： 0002-7863            Impact factor:   15.419


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  18 in total

1.  SEEKR: Simulation Enabled Estimation of Kinetic Rates, A Computational Tool to Estimate Molecular Kinetics and Its Application to Trypsin-Benzamidine Binding.

Authors:  Lane W Votapka; Benjamin R Jagger; Alexandra L Heyneman; Rommie E Amaro
Journal:  J Phys Chem B       Date:  2017-03-03       Impact factor: 2.991

2.  Complete reconstruction of an enzyme-inhibitor binding process by molecular dynamics simulations.

Authors:  Ignasi Buch; Toni Giorgino; Gianni De Fabritiis
Journal:  Proc Natl Acad Sci U S A       Date:  2011-06-06       Impact factor: 11.205

3.  Multiple Ligand Unbinding Pathways and Ligand-Induced Destabilization Revealed by WExplore.

Authors:  Alex Dickson; Samuel D Lotz
Journal:  Biophys J       Date:  2017-02-28       Impact factor: 4.033

4.  Multiensemble Markov models of molecular thermodynamics and kinetics.

Authors:  Hao Wu; Fabian Paul; Christoph Wehmeyer; Frank Noé
Journal:  Proc Natl Acad Sci U S A       Date:  2016-05-25       Impact factor: 11.205

5.  Adaptive Multilevel Splitting Method for Molecular Dynamics Calculation of Benzamidine-Trypsin Dissociation Time.

Authors:  Ivan Teo; Christopher G Mayne; Klaus Schulten; Tony Lelièvre
Journal:  J Chem Theory Comput       Date:  2016-05-18       Impact factor: 6.006

Review 6.  Binding Analysis Using Accelerated Molecular Dynamics Simulations and Future Perspectives.

Authors:  Shristi Pawnikar; Apurba Bhattarai; Jinan Wang; Yinglong Miao
Journal:  Adv Appl Bioinform Chem       Date:  2022-01-06

7.  Simulations of the regulatory ACT domain of human phenylalanine hydroxylase (PAH) unveil its mechanism of phenylalanine binding.

Authors:  Yunhui Ge; Elias Borne; Shannon Stewart; Michael R Hansen; Emilia C Arturo; Eileen K Jaffe; Vincent A Voelz
Journal:  J Biol Chem       Date:  2018-10-04       Impact factor: 5.157

8.  Benzamidine as a spectroscopic probe for the primary specificity subsite of trypsin-like serine proteinases. A case for BPTI binding to bovine beta-trypsin.

Authors:  P Ascenzi; M Bolognesi; M Guarneri; E Menegatti; G Amiconi
Journal:  Mol Cell Biochem       Date:  1984-09       Impact factor: 3.396

9.  Kinetics of protein-ligand unbinding: Predicting pathways, rates, and rate-limiting steps.

Authors:  Pratyush Tiwary; Vittorio Limongelli; Matteo Salvalaglio; Michele Parrinello
Journal:  Proc Natl Acad Sci U S A       Date:  2015-01-20       Impact factor: 11.205

10.  Ligand Gaussian Accelerated Molecular Dynamics (LiGaMD): Characterization of Ligand Binding Thermodynamics and Kinetics.

Authors:  Yinglong Miao; Apurba Bhattarai; Jinan Wang
Journal:  J Chem Theory Comput       Date:  2020-08-07       Impact factor: 6.006
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