Literature DB >> 533669

Non-repetitive DNA sequence divergence in phylogenetically diploid and tetraploid teleostean species of the family cyprinidae and the order isospondyli.

J Schmidtke, E Schmitt, E Matzke, W Engel.   

Abstract

Non-repetitive DNA of anciently tetraploid teleostean species was analysed for the presence of duplicated sequences. Closely related diploid species were investigated in comparison. From the reassociation kinetics of total nuclear DNA, rate constants and fraction sizes of classes of repetitive and non-repetitive sequences were determined. DNA fractions enriched in the slowest renaturing sequence class were determined. DNA fractions enriched in the slowest renaturing sequence class were prepared and subjected to reassociation. The rate constants of these reactions were compared with the values expected for single-copy DNA from analytical genome size determinations. From reassociated DNA enriched in non-repetitive sequences also the melting temperatures were determined as a measure of internal base sequence heterogeneity. It has been shown that the two ancient tetraploids Cyprinus carpio and Thymallus thymallus are, with regard to the thermal stability of reassociated non-repetitive DNA, and with regard to the correspondence of reaction rates with the values expected for single copy DNA, indistinguishable from diploid controls (Rutilus rutilus, Clupea harengus and Sprattus sprattus). The tetraploid species Salmo irideus, Salvelinus fontinalis and Coregonus lavaretus appear as very recent tetraploids with regard to these criteria. The significance of the results for estimating the time of occurrence of polyploidisation events in these taxa is discussed.

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Year:  1979        PMID: 533669     DOI: 10.1007/BF00292207

Source DB:  PubMed          Journal:  Chromosoma        ISSN: 0009-5915            Impact factor:   4.316


  31 in total

1.  Sequence organization of the human genome.

Authors:  C W Schmid; P L Deininger
Journal:  Cell       Date:  1975-11       Impact factor: 41.582

2.  Gene action in fish of tetraploid origin. III. Ribosomal DNA amount in cyprinid fish.

Authors:  J Schmidtke; W Engel
Journal:  Biochem Genet       Date:  1976-02       Impact factor: 1.890

3.  Genetic distance and electrophoretic identity of proteins between taxa.

Authors:  M Nei; R Chakraborty
Journal:  J Mol Evol       Date:  1973-11-27       Impact factor: 2.395

4.  Analysis of repeating DNA sequences by reassociation.

Authors:  R J Britten; D E Graham; B R Neufeld
Journal:  Methods Enzymol       Date:  1974       Impact factor: 1.600

5.  DNA and RNA content in diploid and tetraploid amphibians.

Authors:  W Beçak; G Goissis
Journal:  Experientia       Date:  1971-03-15

6.  DNA sequence organization in the soybean plant.

Authors:  R B Goldberg
Journal:  Biochem Genet       Date:  1978-02       Impact factor: 1.890

7.  The single-copy DNA sequence polymorphism of the sea urchin Strongylocentrotus purpuratus.

Authors:  R J Britten; A Cetta; E H Davidson
Journal:  Cell       Date:  1978-12       Impact factor: 41.582

8.  DNA sequence organization in the pea genome.

Authors:  M G Murray; R E Cuellar; W F Thompson
Journal:  Biochemistry       Date:  1978-12-26       Impact factor: 3.162

9.  Cytological evidence of constant tetraploidy in the bisexual South American frog Odontophrynus americanus.

Authors:  M L Beçak; W Beçak; M N Rabello
Journal:  Chromosoma       Date:  1966       Impact factor: 4.316

10.  POST-ZYGOTIC CHROMOSOMAL REARRANGEMENTS IN RAINBOW TROUT (SALMO IRIDEUS GIBBONS).

Authors:  S OHNO; C STENIUS; E FAISST; M T ZENZES
Journal:  Cytogenetics       Date:  1965
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  7 in total

1.  Generation and analysis of 25 Mb of genomic DNA from the pufferfish Fugu rubripes by sequence scanning.

Authors:  G Elgar; M S Clark; S Meek; S Smith; S Warner; Y J Edwards; N Bouchireb; A Cottage; G S Yeo; Y Umrania; G Williams; S Brenner
Journal:  Genome Res       Date:  1999-10       Impact factor: 9.043

2.  Hidden breaks in ribosomal RNA of phylogenetically tetraploid fish and their possible role in the diploidization process.

Authors:  M Leipoldt; W Engel
Journal:  Biochem Genet       Date:  1983-08       Impact factor: 1.890

Review 3.  Sequence organization of animal nuclear DNA.

Authors:  J Schmidtke; J T Epplen
Journal:  Hum Genet       Date:  1980       Impact factor: 4.132

4.  Single-copy DNA relationships between diploid and tetraploid teleostean fish species.

Authors:  J Schmidtke; I Kandt
Journal:  Chromosoma       Date:  1981       Impact factor: 4.316

5.  Genome duplication, a trait shared by 22000 species of ray-finned fish.

Authors:  John S Taylor; Ingo Braasch; Tancred Frickey; Axel Meyer; Yves Van de Peer
Journal:  Genome Res       Date:  2003-03       Impact factor: 9.043

6.  Single copy DNA homology in sea stars.

Authors:  M J Smith; R Nicholson; M Stuerzl; A Lui
Journal:  J Mol Evol       Date:  1982       Impact factor: 2.395

Review 7.  Towards an understanding of the molecular mechanisms regulating gene expression during diploidization in phylogenetically polyploid lower vertebrates.

Authors:  M Leipoldt
Journal:  Hum Genet       Date:  1983       Impact factor: 4.132

  7 in total

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