Literature DB >> 5257120

Minimization of polypeptide energy. VII. Second derivatives and statistical weights of energy minima for deca-L-alanine.

K D Gibson, H A Scheraga.   

Abstract

The matrix of second derivatives of 21 apparent local energy minima of deca-L-alanine has been computed. The results show that all these conformations are true local energy minima and, therefore, potentially stable conformations for this peptide. Calculations of the relative statistical weights of these conformations confirm earlier theoretical considerations on the importance of the librational free energy of stable conformations of peptides. As predicted earlier, the relative statistical weights of the local energy minima do not always fall in the same order as the relative energies.

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Year:  1969        PMID: 5257120      PMCID: PMC223553          DOI: 10.1073/pnas.63.2.242

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  4 in total

1.  Minimization of polypeptide energy, vi. Systematic searches for low-energy conformations of deca-L-alanine and the octapeptide loop of ribonuclease.

Authors:  K D Gibson; H A Scheraga
Journal:  Proc Natl Acad Sci U S A       Date:  1969-05       Impact factor: 11.205

2.  Conformational studies of poly-L-alanine in water.

Authors:  R T Ingwall; H A Scheraga; N Lotan; A Berger; E Katchalski
Journal:  Biopolymers       Date:  1968       Impact factor: 2.505

3.  Minimization of polypeptide energy. I. Preliminary structures of bovine pancreatic ribonuclease S-peptide.

Authors:  K D Gibson; H A Scheraga
Journal:  Proc Natl Acad Sci U S A       Date:  1967-08       Impact factor: 11.205

4.  Molecular theory of the helix-coil transition in polyamino acids, I. Formulation.

Authors:  N Go; M Go; H A Scheraga
Journal:  Proc Natl Acad Sci U S A       Date:  1968-04       Impact factor: 11.205

  4 in total

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