Literature DB >> 486153

Crystal structures of hen egg-white lysozyme complexes with gadolinium(III) and gadolinium(III)-N-acetyl-D-glucosamine.

S J Perkins, L N Johnson, P A Machin, D C Phillips.   

Abstract

Analysis at 0.25 nm resolution of the crystal structures of lysozyme-Gd(III) and lysozyme-Gd(III)-N-acetyl-D-glucosamine (GlcNac), prepared by diffusion methods, show that there are two main binding positions for Gd(III), one of which is close to glutamic acid-35 and the other close to aspartic acid-52. The two sites are 0.36 nm part. There is no evidence for the weak binding of Gd(III) to any of the eight other carboxy groups of lysozyme. In the presence of Gd(III), the binding of GlcNac is similar to that observed for the binding of the beta-anomer in subsite C. There are numerous small conformational changes in the protein on binding (Gd(III) and the sugar, and these have been quantified to a first approximation by real-space refinement. These changes are similar in both structures, and involve, among other small movements, shifts of one of the disulphide bridges by up to 0.05 nm. The movement of residues 70--74 observed in the binary complex of lysozyme-GlcNac [Perkins, Johnson, Machin & Phillips (1978) Biochem. J. 173-617] is not observed in the ternary complex of lysozyme-Gd(III)-GlcNac. The nature of the lysozyme-Gd(III) complex is discussed in the light of evidence from other crystallographic studies and n.m.r. solution studies. Preliminary findings for a lysozyme-Gd(III) complex prepared by co-crystallization methods are reported.

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Year:  1979        PMID: 486153      PMCID: PMC1161121          DOI: 10.1042/bj1810021

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  15 in total

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2.  Lanthanide induced NMR perturbations of HEW lysozyme: evidence for nonaxial symmetry.

Authors:  D G Agresti; R E Lenkinski; J D Glickson
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3.  Binding of divalent copper ions to aspartic acid residue 52 in hen egg-white lysozyme.

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Journal:  J Mol Biol       Date:  1974-08-05       Impact factor: 5.469

4.  The mechanism of water-proton relaxation in enzyme paramagnetic-ion complexes. 1. The Gd(3)-lysozyme complex.

Authors:  R Jones; R A Dwek
Journal:  Eur J Biochem       Date:  1974-09-01

5.  The lanthanide cations as probes in biological systems. Proton relaxation enhancement studies for model systems and lysozyme.

Authors:  R A Dwek; R E Richards; K G Morallee; E Nieboer; R J Williams; A V Xavier
Journal:  Eur J Biochem       Date:  1971-07-29

6.  Ionization constants of Glu 35 and Asp 52 in hen, turkey, and human lysozymes.

Authors:  S Kuramitsu; K Ikeda; K Hamaguchi; H Fujio; T Amano
Journal:  J Biochem       Date:  1974-10       Impact factor: 3.387

7.  Real-space refinement of the structure of hen egg-white lysozyme.

Authors:  R Diamond
Journal:  J Mol Biol       Date:  1974-01-25       Impact factor: 5.469

8.  The effect of gadolinium ion on the binding of inhibitors and substrates to lysozyme.

Authors:  I I Secemski; G E Lienhard
Journal:  J Biol Chem       Date:  1974-05-10       Impact factor: 5.157

9.  An analysis of the Co2+-induced nuclear magnetic resonance perturbations of hen egg white lysozyme.

Authors:  R E Lenkinski; D G Agresti; D M Chen; J D Glickson
Journal:  Biochemistry       Date:  1978-04-18       Impact factor: 3.162

10.  Crystal structures of egg-white lysozyme of hen in acetate-free medium and of lysozyme complexes with N-acetylglucosamine and beta-methyl N-acetylglucosaminide.

Authors:  S J Perkins; L N Johnson; P A Machin; D C Phillips
Journal:  Biochem J       Date:  1978-08-01       Impact factor: 3.857

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