Selective inhibition of genetic transcription in sea urchin embryos. Incorporation of 5-bromodeoxyuridine into low molecular weight nuclear DNA.

Experimental evidence suggests that exposure of sea urchin gastrulae to 5-bromodeoxyuridine (BUdR), an analog of thymidine, causes a reduction in the rate of synthesis of some RNA species usually transcribed at this stage of development. In pulse-chase experiments, (3)H (in gastrula stage 8-15S nuclear DNA labeled with BUdR-(3)H) could not be chased, with unlabeled BUdR, into 20-60S size-range DNA; in similar experiments in which gastrulae were pulsed with thymidine-(3)H and then chased with unlabeled thymidine, (3)H in 8-15S nuclear DNA could be extensively chased into 20-60S DNA. DNA-RNA hybridization assays indicate that gastrula stage nuclear DNA in the range of 20-60S has greater sequence homology for gastrula stage RNA-(3)H than does nuclear DNA of similar size-range taken from gastrulae exposed to BUdR for 1 hr. An explanation is offered for the effect of BUdR on transcription and DNA replication in sea urchin embryos.