Literature DB >> 4521217

Statistical mechanics applied to cooperative ligand binding to proteins.

T R Chay, C Ho.   

Abstract

By using the lattice statistical argument, we have shown that for a protein whose subunits have the same number of neighbors, the three parameters (K(AB), K(BB), and K(S)K(t)) in the sequential theory formulated by Koshland, Nemethy, and Filmer [Biochemistry (1966) 5, 365] can be reduced to two parameters. One of the parameters, Z, measures the strength of the subunit interactions and is related to the apparent free energy of interaction (DeltaF degrees I) by Z = exp (-DeltaF degrees I/2mkT), where m is the number of neighbors in a subunit and kT has the usual meaning. In addition, we relate Wyman's allosteric binding potential [Advan. Protein Chem. (1964) 19, 223] to the canonical partition function of the McMillan-Mayer theory [J. Chem. Phys. (1945) 13, 276]. An explicit form relating the apparent free energy of interaction and the Hill coefficient is given for an allosteric protein that has nonequivalent and independent ligand-binding sites. The present formulation can be used to account for a number of recent experimental results on hemoglobins.

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Year:  1973        PMID: 4521217      PMCID: PMC427356          DOI: 10.1073/pnas.70.12.3914

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  14 in total

1.  THE BINDING POTENTIAL, A NEGLECTED LINKAGE CONCEPT.

Authors:  J WYMAN
Journal:  J Mol Biol       Date:  1965-03       Impact factor: 5.469

2.  ON THE NATURE OF ALLOSTERIC TRANSITIONS: A PLAUSIBLE MODEL.

Authors:  J MONOD; J WYMAN; J P CHANGEUX
Journal:  J Mol Biol       Date:  1965-05       Impact factor: 5.469

3.  Nuclear magnetic resonance and spin-label studies of hemoglobin Kempsey.

Authors:  T R Lindstrom; J J Baldassare; H F Bunn; C Ho
Journal:  Biochemistry       Date:  1973-10-09       Impact factor: 3.162

4.  States of hemoglobin in solution.

Authors:  R T Ogata; H M McConnell
Journal:  Biochemistry       Date:  1972-12-05       Impact factor: 3.162

5.  Carbon monoxide binding by hemoglobin and myoglobin under photodissociating conditions.

Authors:  M Brunori; J Bonaventura; C Bonaventura; E Antonini; J Wyman
Journal:  Proc Natl Acad Sci U S A       Date:  1972-04       Impact factor: 11.205

6.  Kinetics of small Ising systems: deviations from internal equilibrium in a tetrahedral model.

Authors:  E Paul; T L Hill
Journal:  Proc Natl Acad Sci U S A       Date:  1972-08       Impact factor: 11.205

7.  Nuclear magnetic resonance studies of hemoglobins. VI. Heme proton spectra of human deoxyhemoglobins and their relevance to the nature of co-operative oxygenation of hemoglobin.

Authors:  D G Davis; T R Lindstrom; N H Mock; J J Baldassare; S Charache; R T Jones; C Ho
Journal:  J Mol Biol       Date:  1971-08-28       Impact factor: 5.469

8.  The oxidation of haemoglobin.

Authors:  R J Watts-Tobin
Journal:  J Mol Biol       Date:  1967-02-14       Impact factor: 5.469

9.  Functional nonequivalence of and hemes in human adult hemoglobin.

Authors:  T R Lindstrom; C Ho
Journal:  Proc Natl Acad Sci U S A       Date:  1972-07       Impact factor: 11.205

10.  Nuclear magnetic resonance studies of hemoglobins. 3. Evidence for the nonequivalence of alpha- and beta-hains in azide derivativeof methemoglobins.

Authors:  D G Davis; S Charache; C Ho
Journal:  Proc Natl Acad Sci U S A       Date:  1969-08       Impact factor: 11.205

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  2 in total

1.  Complete integrability of information processing by biochemical reactions.

Authors:  Elena Agliari; Adriano Barra; Lorenzo Dello Schiavo; Antonio Moro
Journal:  Sci Rep       Date:  2016-11-04       Impact factor: 4.379

2.  Collective behaviours: from biochemical kinetics to electronic circuits.

Authors:  Elena Agliari; Adriano Barra; Raffaella Burioni; Aldo Di Biasio; Guido Uguzzoni
Journal:  Sci Rep       Date:  2013-12-10       Impact factor: 4.379

  2 in total

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