Literature DB >> 4519627

Both the fast and slow refolding reactions of ribonuclease A yield native enzyme.

J R Garel, R L Baldwin.   

Abstract

The fast reaction ((T2) approximately 50 msec) observed previously in the refolding of thermally unfolded ribonuclease A (disulfide bonds intact) has now been studied by two properties indicative of enzyme function: binding of a competitive inhibitor (2'CMP) and hydrolysis of a substrate (CpA --> C > p + A). Both the binding and catalytic reactions are fast (<2 msec) compared to refolding. Binding of 2'CMP occurs during both fast and slow refolding reactions, and the protein folded in the fast reaction has a normal binding constant for 2'CMP. Recovery of enzymatic activity during the fast refolding reaction, as measured by the rate of CpA hydrolysis, parallels the kinetic curve for 2'CMP binding. When the kinetics of refolding are measured by the burying of exposed tyrosine groups, no difference is found. The presence of 2'CMP has no effect on the kinetics of refolding. The results show that the fast refolding reaction does not yield an intermediate in the refolding of RNase A. Instead, both fast and slow refolding reactions have a common product, fully active RNase A. Although they show a 100-fold difference in rates of refolding, the starting materials for the fast and slow refolding reactions have similar properties, as regards: (a) the molar absorbancy at 286 nm, reflecting the state of exposed tyrosine groups, and (b) their apparent failure to bind 2'CMP.

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Year:  1973        PMID: 4519627      PMCID: PMC427234          DOI: 10.1073/pnas.70.12.3347

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  20 in total

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Authors:  G Kartha; J Bello; D Harker
Journal:  Nature       Date:  1967-03-04       Impact factor: 49.962

Review 2.  Relaxation spectrometry of biological systems.

Authors:  G G Hammes
Journal:  Adv Protein Chem       Date:  1968

3.  Binding of phosphate ligands to ribonuclease A.

Authors:  D G Anderson; G G Hammes; F G Walz
Journal:  Biochemistry       Date:  1968-05       Impact factor: 3.162

4.  Kinetic evidence for incorrectly folded intermediate states in the refolding of denatured proteins.

Authors:  A Ikai; C Tanford
Journal:  Nature       Date:  1971-03-12       Impact factor: 49.962

5.  A sequential model of nucleation-dependent protein folding: kinetic studies of ribonuclease A.

Authors:  T Y Tsong; R L Baldwin
Journal:  J Mol Biol       Date:  1972-02-14       Impact factor: 5.469

6.  Folding of staphylococcal nuclease: kinetic studies of two processes in acid renaturation.

Authors:  H F Epstein; A N Schechter; R F Chen; C B Anfinsen
Journal:  J Mol Biol       Date:  1971-09-28       Impact factor: 5.469

7.  Analysis of the vibrational structure in the near-ultraviolet circular dichroism and absorption spectra of tyrosine derivatives and ribonuclease-A at 77 degrees K.

Authors:  J Horwitz; E H Strickland; C Billups
Journal:  J Am Chem Soc       Date:  1970-04-08       Impact factor: 15.419

8.  The three-dimensional structure of ribonuclease-S. Interpretation of an electron density map at a nominal resolution of 2 A.

Authors:  H W Wyckoff; D Tsernoglou; A W Hanson; J R Knox; B Lee; F M Richards
Journal:  J Biol Chem       Date:  1970-01-25       Impact factor: 5.157

9.  Do the exposed tyrosine residues of ribonuclease A interact with nucleotides?

Authors:  M Irie; F Sawada
Journal:  J Biochem       Date:  1967-08       Impact factor: 3.387

10.  Evidence for residual structure in acid- and heat-denatured proteins.

Authors:  K C Aune; A Salahuddin; M H Zarlengo; C Tanford
Journal:  J Biol Chem       Date:  1967-10-10       Impact factor: 5.157

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  23 in total

1.  Cis proline mutants of ribonuclease A. I. Thermal stability.

Authors:  D A Schultz; R L Baldwin
Journal:  Protein Sci       Date:  1992-07       Impact factor: 6.725

2.  Protein folding: are we there yet?

Authors:  A Clay Clark
Journal:  Arch Biochem Biophys       Date:  2008-01-01       Impact factor: 4.013

3.  Protein folding: matching theory and experiment.

Authors:  D V Laurents; R L Baldwin
Journal:  Biophys J       Date:  1998-07       Impact factor: 4.033

4.  The problem was to find the problem.

Authors:  R L Baldwin
Journal:  Protein Sci       Date:  1997-09       Impact factor: 6.725

5.  Structural characterization of folding intermediates in cytochrome c by H-exchange labelling and proton NMR.

Authors:  H Roder; G A Elöve; S W Englander
Journal:  Nature       Date:  1988-10-20       Impact factor: 49.962

6.  Direct observation of parallel folding pathways revealed using a symmetric repeat protein system.

Authors:  Tural Aksel; Doug Barrick
Journal:  Biophys J       Date:  2014-07-01       Impact factor: 4.033

Review 7.  Toward a better understanding of protein folding pathways.

Authors:  T E Creighton
Journal:  Proc Natl Acad Sci U S A       Date:  1988-07       Impact factor: 11.205

8.  A carboxypeptidase Y pulse method to study the accessibility of the C-terminal end during the refolding of ribonuclease A.

Authors:  W Teschner; R Rudolph
Journal:  Biochem J       Date:  1989-06-01       Impact factor: 3.857

9.  Role of proline peptide bond isomerization in unfolding and refolding of ribonuclease.

Authors:  F X Schmid; R Grafl; A Wrba; J J Beintema
Journal:  Proc Natl Acad Sci U S A       Date:  1986-02       Impact factor: 11.205

10.  Molecular basis for proline- and arginine-rich peptide inhibition of proteasome.

Authors:  Asokan Anbanandam; Diana C Albarado; Daniela C Tirziu; Michael Simons; Sudha Veeraraghavan
Journal:  J Mol Biol       Date:  2008-09-16       Impact factor: 5.469

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