Literature DB >> 4332014

A structure of pyridine nucleotides in solution.

N J Oppenheimer, L J Arnold, N O Kaplan.   

Abstract

Re-examination of the structure of pyridine coenzymes in solution by use of the 220-MHz high-frequency nuclear magnetic resonance spectrometer indicates that there is primarily one folded structure that is in rapid equilibrium with an open form. Reduced DPN(+) and reduced analogs of DPN(+) exist predominantly with the B side of the dihydropyridine ring folded against the adenine moiety. (The oxidized coenzymes appear to exist in the same folded structure.) Furthermore, the ribose protons undergo very little conformational change upon reduction of the pyridine ring; this observation strongly suggests a considerable similarity between the folded forms of the oxidized and reduced coenzymes. A model of the folded structure is presented.

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Year:  1971        PMID: 4332014      PMCID: PMC389621          DOI: 10.1073/pnas.68.12.3200

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  14 in total

1.  DITHIOTHREITOL, A NEW PROTECTIVE REAGENT FOR SH GROUPS.

Authors:  W W CLELAND
Journal:  Biochemistry       Date:  1964-04       Impact factor: 3.162

2.  The conformation of pyridine dinucleotides in solution.

Authors:  O Jardetzky; N G Wade-Jardetzky
Journal:  J Biol Chem       Date:  1966-01-10       Impact factor: 5.157

3.  High frequency nuclear magnetic resonance study of the M and P helices of reduced pyridine dinucleotides.

Authors:  R H Sarma; N O Kaplan
Journal:  Biochemistry       Date:  1970-02-03       Impact factor: 3.162

4.  Investigation of the configuration and conformation of N-methyl-N-ethylnicotinamide-adenine dinucleotide by nuclear magnetic resonance spectroscopy.

Authors:  R H Sarma; M Moore; N O Kaplan
Journal:  Biochemistry       Date:  1970-02-03       Impact factor: 3.162

5.  High frequency nuclear magnetic resonance investigation of the backbone of oxidized and reduced pyridine nucleotides.

Authors:  R H Sarma; N O Kaplan
Journal:  Biochemistry       Date:  1970-02-03       Impact factor: 3.162

6.  220 MHz proton magnetic resonance spectrum of NADH.

Authors:  D J Patel
Journal:  Nature       Date:  1969-03-29       Impact factor: 49.962

7.  220 MHz nuclear magnetic resonance spectra of oxidized and reduced pyridine dinucleotides.

Authors:  R H Sarma; N O Kaplan
Journal:  J Biol Chem       Date:  1969-02-25       Impact factor: 5.157

8.  [Transformation of alpha-nicotinamide-adenin-dinucleotide into the beta isomer].

Authors:  C Woenckhaus; P Zumpe
Journal:  Biochem Z       Date:  1965-12-01

9.  Mechanisms of the primary acid modification reaction of reduced diphosphopyridine nucleotide models.

Authors:  C S Kim; S Chaykin
Journal:  Biochemistry       Date:  1968-06       Impact factor: 3.162

10.  Investigation of the conformation of beta-diphosphopyridine nucleotide (beta-nicotinamide-adenine dinucleotide) and pyridine dinucleotide analogs by proton magnetic resonance.

Authors:  R H Sarma; V Ross; N O Kaplan
Journal:  Biochemistry       Date:  1968-09       Impact factor: 3.162

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  10 in total

1.  Unusual folded conformation of nicotinamide adenine dinucleotide bound to flavin reductase P.

Authors:  J J Tanner; S C Tu; L J Barbour; C L Barnes; K L Krause
Journal:  Protein Sci       Date:  1999-09       Impact factor: 6.725

2.  Dynamic and static quenching of 1,N6-ethenoadenine fluorescence in nicotinamide 1,N6-ethenoadenine dinucleotide and in 1,N6-etheno-9-(3-(indol-3-yl) propyl) adenine.

Authors:  B A Gruber; N J Leonard
Journal:  Proc Natl Acad Sci U S A       Date:  1975-10       Impact factor: 11.205

3.  Aconitase is the main functional target of aging in the citric acid cycle of kidney mitochondria from mice.

Authors:  Connie S Yarian; Dikran Toroser; Rajindar S Sohal
Journal:  Mech Ageing Dev       Date:  2005-11-10       Impact factor: 5.432

4.  Mechanistic Analysis of Fluorescence Quenching of Reduced Nicotinamide Adenine Dinucleotide by Oxamate in Lactate Dehydrogenase Ternary Complexes.

Authors:  Huo-Lei Peng; Robert Callender
Journal:  Photochem Photobiol       Date:  2017-06-22       Impact factor: 3.421

5.  A fluorescent analog of nicotinamide adenine dinucleotide.

Authors:  J R Barrio; J A Secrist; N J Leonard
Journal:  Proc Natl Acad Sci U S A       Date:  1972-08       Impact factor: 11.205

6.  Conformations of diphosphopyridine coenzymes upon binding to dehydrogenases.

Authors:  C Y Lee; R D Eichner; N O Kaplan
Journal:  Proc Natl Acad Sci U S A       Date:  1973-05       Impact factor: 11.205

7.  Catalytic-rate improvement of a thermostable malate dehydrogenase by a subtle alteration in cofactor binding.

Authors:  R M Alldread; D M Halsall; A R Clarke; T K Sundaram; T Atkinson; M D Scawen; D J Nicholls
Journal:  Biochem J       Date:  1995-01-15       Impact factor: 3.857

8.  The mechanism of the quinone reductase reaction of pig heart lipoamide dehydrogenase.

Authors:  J Vienozinskis; A Butkus; N Cenas; J Kulys
Journal:  Biochem J       Date:  1990-07-01       Impact factor: 3.857

9.  Conformational Preferences of Pyridone Adenine Dinucleotides from Molecular Dynamics Simulations.

Authors:  David P Buckley; Marie E Migaud; John J Tanner
Journal:  Int J Mol Sci       Date:  2022-10-06       Impact factor: 6.208

10.  Investigation of NADH binding, hydride transfer, and NAD(+) dissociation during NADH oxidation by mitochondrial complex I using modified nicotinamide nucleotides.

Authors:  James A Birrell; Judy Hirst
Journal:  Biochemistry       Date:  2013-05-30       Impact factor: 3.162

  10 in total

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