Literature DB >> 4065574

Genes coding for 5S ribosomal RNA of the nematode Caenorhabditis elegans.

D W Nelson, B M Honda.   

Abstract

We have identified a 1-kb genomic sequence that represents the major class of 5S rRNA genes in the nematode Caenorhabditis elegans. This 1-kb sequence is tandemly repeated 110 times in the haploid genome forming a single homogeneous gene family. Other nematode genomic sequences, distinct from the major 1-kb repeat class but homologous to it, may represent dispersed 5S rRNA genes or the ends of a gene cluster. One such fragment shows a restriction fragment length difference between two C. elegans strains. This should allow the genetic analysis of 5S rRNA-coding DNA (5S X rDNA) and its flanking regions in C. elegans.

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Year:  1985        PMID: 4065574     DOI: 10.1016/0378-1119(85)90224-0

Source DB:  PubMed          Journal:  Gene        ISSN: 0378-1119            Impact factor:   3.688


  19 in total

1.  Mutant Caenorhabditis elegans RNA polymerase II with a 20,000-fold reduced sensitivity to alpha-amanitin.

Authors:  T M Rogalski; M Golomb; D L Riddle
Journal:  Genetics       Date:  1990-12       Impact factor: 4.562

2.  In Euglena, spliced-leader RNA (SL-RNA) and 5S rRNA genes are tandemly repeated.

Authors:  M Keller; L H Tessier; R L Chan; J H Weil; P Imbault
Journal:  Nucleic Acids Res       Date:  1992-04-11       Impact factor: 16.971

3.  Detection of mutations and DNA polymorphisms using whole genome Southern Cross hybridization.

Authors:  G Ruvkun; W Gilbert; H R Horvitz
Journal:  Nucleic Acids Res       Date:  1990-02-25       Impact factor: 16.971

4.  NeSL-1, an ancient lineage of site-specific non-LTR retrotransposons from Caenorhabditis elegans.

Authors:  H S Malik; T H Eickbush
Journal:  Genetics       Date:  2000-01       Impact factor: 4.562

5.  A second trans-spliced RNA leader sequence in the nematode Caenorhabditis elegans.

Authors:  X Y Huang; D Hirsh
Journal:  Proc Natl Acad Sci U S A       Date:  1989-11       Impact factor: 11.205

6.  Organization and expression of 5S rRNA genes in the parasitic nematode, Brugia malayi.

Authors:  R M Ransohoff; J A Denker; A M Takacs; G J Hannon; T W Nilsen
Journal:  Nucleic Acids Res       Date:  1989-05-25       Impact factor: 16.971

7.  Flexibility and constraint in the nucleosome core landscape of Caenorhabditis elegans chromatin.

Authors:  Steven M Johnson; Frederick J Tan; Heather L McCullough; Daniel P Riordan; Andrew Z Fire
Journal:  Genome Res       Date:  2006-10-12       Impact factor: 9.043

8.  Two highly conserved transcribed regions in the 5S DNA repeats of the nematodes Caenorhabditis elegans and Caenorhabditis briggsae.

Authors:  D W Nelson; B M Honda
Journal:  Nucleic Acids Res       Date:  1989-11-11       Impact factor: 16.971

9.  A 22-nucleotide spliced leader sequence in the human parasitic nematode Brugia malayi is identical to the trans-spliced leader exon in Caenorhabditis elegans.

Authors:  A M Takacs; J A Denker; K G Perrine; P A Maroney; T W Nilsen
Journal:  Proc Natl Acad Sci U S A       Date:  1988-11       Impact factor: 11.205

10.  Unusual sequences, homologous to 5S RNA, in ribosomal DNA repeats of the nematode Meloidogyne arenaria.

Authors:  H Vahidi; J Curran; D W Nelson; J M Webster; M A McClure; B M Honda
Journal:  J Mol Evol       Date:  1988       Impact factor: 2.395

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