Literature DB >> 4061823

The analysis of ligand-binding data with experimental uncertainties in the independent variables.

M L Johnson.   

Abstract

The method of experimental data analysis known as least-squares requires several inherent assumptions to be met in order for the analysis to be statistically correct. In particular, it must be assumed that the experimental uncertainties exist only on the dependent variables. Least-squares is often used for applications where this assumption is not satisfied. An alternative method of data analysis circumvents the assumption that no experimental uncertainty exists in the independent variables. This method, known as maximum likelihood, will produce statistically correct results in cases where experimental uncertainty exists on both the dependent and independent variables. The method can easily be generalized to include cases where the dependent and independent variables are cross-correlated. The method can also be generalized to include non-Gaussian distributions of experimental uncertainties. The examples presented are simulated applications to ligand-binding problems. The general method is, however, applicable to a wide range of problems in biochemistry.

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Year:  1985        PMID: 4061823     DOI: 10.1016/0003-2697(85)90254-4

Source DB:  PubMed          Journal:  Anal Biochem        ISSN: 0003-2697            Impact factor:   3.365


  5 in total

1.  Distance distributions and dynamics of a zinc finger peptide from fluorescence resonance energy transfer measurements.

Authors:  P S Eis; J Kuśba; M L Johnson; J R Lakowicz
Journal:  J Fluoresc       Date:  1993-03       Impact factor: 2.217

2.  An analytic solution to the Monod-Wyman-Changeux model and all parameters in this model.

Authors:  G Zhou; P S Ho; K E van Holde
Journal:  Biophys J       Date:  1989-02       Impact factor: 4.033

3.  Membrane lateral compressibility determined by NMR and x-ray diffraction: effect of acyl chain polyunsaturation.

Authors:  B W Koenig; H H Strey; K Gawrisch
Journal:  Biophys J       Date:  1997-10       Impact factor: 4.033

4.  A simple model-free method for direct assessment of fluorescent ligand binding by linear spectral summation.

Authors:  Oktay K Gasymov; Adil R Abduragimov; Ben J Glasgow
Journal:  J Fluoresc       Date:  2013-09-18       Impact factor: 2.217

5.  Characterizing low affinity epibatidine binding to α4β2 nicotinic acetylcholine receptors with ligand depletion and nonspecific binding.

Authors:  Alexandra M Person; Gregg B Wells
Journal:  BMC Biophys       Date:  2011-11-23       Impact factor: 4.778

  5 in total

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