Literature DB >> 4004447

Deoxyribonucleic acid homologies among 96 strains of ammonia-oxidizing bacteria.

H P Koops, H Harms.   

Abstract

DNA of 96 strains of the genera Nitrosomonas, Nitrosococcus, Nitrosospira, Nitrosolobus, and Nitrosovibrio was isolated and analysed spectrophotometrically. Percentages of guanine plus cytosine (G + C) content, genome sizes, and DNA-DNA homologies were determined. The results indicated the presence of eight Nitrosomonas species, three or four Nitrosococcus species, five Nitrosospira species, and two species of both Nitrosolobus and Nitrosovibrio. DNA homologies between strains of a separate species ranged from 56-100%. Average homologies between strains of different species were 33% in Nitrosococcus, 36% in Nitrosomonas, 37% in Nitrosolobus, 40% in Nitrosospira, and 42% in Nitrosovibrio. Average homologies between species of different genera were 33% and thus not significantly above the background value of 30% detected between DNA of ammonia-oxidizing bacteria and Escherichia coli. Genome sizes ranged from 1.90 - 2.74 X 10(9) dalton in Nitrosomonas, 2.09 - 2.37 X 10(9) dalton in Nitrosococcus, 1.87 - 2.15 X 10(9) dalton in Nitrosospira, 1.92 - 2.10 X 10(9) dalton in Nitrosolobus, and 1.91 - 2.15 X 10(9) dalton in Nitrosovibrio. Differences in genome sizes were in accordance with DNA homologies.

Entities:  

Mesh:

Substances:

Year:  1985        PMID: 4004447     DOI: 10.1007/bf00408061

Source DB:  PubMed          Journal:  Arch Microbiol        ISSN: 0302-8933            Impact factor:   2.552


  6 in total

1.  Studies on the spectrophotometric determination of DNA hybridization from renaturation rates.

Authors:  V A Huss; H Festl; K H Schleifer
Journal:  Syst Appl Microbiol       Date:  1983       Impact factor: 4.022

2.  Reexamination of the association between melting point, buoyant density, and chemical base composition of deoxyribonucleic acid.

Authors:  J De Ley
Journal:  J Bacteriol       Date:  1970-03       Impact factor: 3.490

Review 3.  Molecular systematics of prokaryotes.

Authors:  K H Schleifer; E Stackebrandt
Journal:  Annu Rev Microbiol       Date:  1983       Impact factor: 15.500

4.  The quantitative measurement of DNA hybridization from renaturation rates.

Authors:  J De Ley; H Cattoir; A Reynaerts
Journal:  Eur J Biochem       Date:  1970-01

5.  The determination of molecular weight of bacterial genome DNA from renaturation rates.

Authors:  M Gillis; J De Ley; M De Cleene
Journal:  Eur J Biochem       Date:  1970-01

6.  Comparison of the morphology and deoxyribonucleic acid composition of 27 strains of nitrifying bacteria.

Authors:  S W Watson; M Mandel
Journal:  J Bacteriol       Date:  1971-08       Impact factor: 3.490

  6 in total
  14 in total

1.  Phylogeny of all recognized species of ammonia oxidizers based on comparative 16S rRNA and amoA sequence analysis: implications for molecular diversity surveys.

Authors:  U Purkhold; A Pommerening-Röser; S Juretschko; M C Schmid; H P Koops; M Wagner
Journal:  Appl Environ Microbiol       Date:  2000-12       Impact factor: 4.792

2.  Phylogeny and functional expression of ribulose 1,5-bisphosphate carboxylase/oxygenase from the autotrophic ammonia-oxidizing bacterium Nitrosospira sp. isolate 40KI.

Authors:  Janne B Utåker; Kjell Andersen; Agot Aakra; Birgitte Moen; Ingolf F Nes
Journal:  J Bacteriol       Date:  2002-01       Impact factor: 3.490

3.  Molecular diversity of soil and marine 16S rRNA gene sequences related to beta-subgroup ammonia-oxidizing bacteria.

Authors:  J R Stephen; A E McCaig; Z Smith; J I Prosser; T M Embley
Journal:  Appl Environ Microbiol       Date:  1996-11       Impact factor: 4.792

4.  Quantitative assessment of ammonia-oxidizing bacterial communities in the epiphyton of submerged macrophytes in shallow lakes.

Authors:  M Coci; G W Nicol; G N Pilloni; M Schmid; M P Kamst-van Agterveld; P L E Bodelier; H J Laanbroek
Journal:  Appl Environ Microbiol       Date:  2010-01-22       Impact factor: 4.792

5.  Evaluation of Leptospirillum ferrooxidans for Leaching.

Authors:  W Sand; K Rohde; B Sobotke; C Zenneck
Journal:  Appl Environ Microbiol       Date:  1992-01       Impact factor: 4.792

6.  Effects of aeration cycles on nitrifying bacterial populations and nitrogen removal in intermittently aerated reactors.

Authors:  Cesar Mota; Melanie A Head; Jennifer A Ridenoure; Jay J Cheng; Francis L de Los Reyes
Journal:  Appl Environ Microbiol       Date:  2005-12       Impact factor: 4.792

7.  Close genetic relationship between Nitrobacter hamburgensis nitrite oxidoreductase and Escherichia coli nitrate reductases.

Authors:  K Kirstein; E Bock
Journal:  Arch Microbiol       Date:  1993       Impact factor: 2.552

8.  A new obligately chemolithoautotrophic, nitrite-oxidizing bacterium, Nitrospira moscoviensis sp. nov. and its phylogenetic relationship.

Authors:  S Ehrich; D Behrens; E Lebedeva; W Ludwig; E Bock
Journal:  Arch Microbiol       Date:  1995-07       Impact factor: 2.552

9.  Evolutionary relationships among ammonia- and nitrite-oxidizing bacteria.

Authors:  A Teske; E Alm; J M Regan; S Toze; B E Rittmann; D A Stahl
Journal:  J Bacteriol       Date:  1994-11       Impact factor: 3.490

10.  Combined molecular and conventional analyses of nitrifying bacterium diversity in activated sludge: Nitrosococcus mobilis and Nitrospira-like bacteria as dominant populations.

Authors:  S Juretschko; G Timmermann; M Schmid; K H Schleifer; A Pommerening-Röser; H P Koops; M Wagner
Journal:  Appl Environ Microbiol       Date:  1998-08       Impact factor: 4.792

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.