Literature DB >> 4000930

The genes for yeast ribosomal proteins S24 and L46 are adjacent and divergently transcribed.

R J Leer, M M van Raamsdonk-Duin, P Kraakman, W H Mager, R J Planta.   

Abstract

Unlike most yeast ribosomal protein genes studied so far the genes coding for S24 and L46 are adjacent on the genome. Sequence analysis showed that the two genes are transcribed divergently, their initiation codons being 630 bp apart. Taking the respective ATG translation start sites as reference points, the 5'- end of L46 mRNA was mapped at position -26, while the S24 mRNA showed two major 5'-ends mapping at positions -13 and -16 respectively. Unlike most other yeast ribosomal protein genes, the gene for S24 does not contain an intron. Its coding region encompasses 390 nucleotides encoding a protein of 14762 D. The gene for L46 on the other hand is split by an intron of 386 nucleotides starting after its second codon. This gene encodes a small, very basic protein having a molecular weight of 6334 D. Yeast ribosomal proteins S24 and L46 show striking homologies with ribosomal proteins from other organisms. In particular, yeast L46 is clearly the evolutionary counterpart of rat liver L39. A search of the intergenic region for sequence elements previously identified as common to most yeast ribosomal protein genes, revealed the presence of a single conserved box (RPG-box) roughly equidistant from the transcription initiation sites of both genes. We suggest that this box acts as a regulatory signal in either orientation and thus influences the expression of both genes simultaneously.

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Year:  1985        PMID: 4000930      PMCID: PMC341029          DOI: 10.1093/nar/13.3.701

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  19 in total

1.  Excision of an intact intron as a novel lariat structure during pre-mRNA splicing in vitro.

Authors:  B Ruskin; A R Krainer; T Maniatis; M R Green
Journal:  Cell       Date:  1984-08       Impact factor: 41.582

2.  The sequence 5'-AAUAAA-3'forms parts of the recognition site for polyadenylation of late SV40 mRNAs.

Authors:  M Fitzgerald; T Shenk
Journal:  Cell       Date:  1981-04       Impact factor: 41.582

3.  The primary structure of the gene encoding yeast ribosomal protein L16.

Authors:  R J Leer; M M van Raamsdonk-Duin; W H Mager; R J Planta
Journal:  FEBS Lett       Date:  1984-10-01       Impact factor: 4.124

4.  Structural comparison of yeast ribosomal protein genes.

Authors:  R J Leer; M M van Raamsdonk-Duin; M J Hagendoorn; W H Mager; R J Planta
Journal:  Nucleic Acids Res       Date:  1984-09-11       Impact factor: 16.971

5.  Isolation of cloned ribosomal protein genes from the yeast Saccharomyces carlsbergensis.

Authors:  G H Bollen; L H Cohen; W H Mager; A W Klaassen; R J Planta
Journal:  Gene       Date:  1981-09       Impact factor: 3.688

6.  Cloning in single-stranded bacteriophage as an aid to rapid DNA sequencing.

Authors:  F Sanger; A R Coulson; B G Barrell; A J Smith; B A Roe
Journal:  J Mol Biol       Date:  1980-10-25       Impact factor: 5.469

7.  Structure and organization of two linked ribosomal protein genes in yeast.

Authors:  C M Molenaar; L P Woudt; A E Jansen; W H Mager; R J Planta; D M Donovan; N J Pearson
Journal:  Nucleic Acids Res       Date:  1984-10-11       Impact factor: 16.971

8.  High resolution mini-two-dimensional gel electrophoresis of yeast ribosomal proteins. A standard nomenclature for yeast ribosomal proteins.

Authors:  G H Bollen; W H Mager; R J Planta
Journal:  Mol Biol Rep       Date:  1981-11-30       Impact factor: 2.316

9.  DNA sequence required for efficient transcription termination in yeast.

Authors:  K S Zaret; F Sherman
Journal:  Cell       Date:  1982-03       Impact factor: 41.582

10.  The yeast MATa1 gene contains two introns.

Authors:  A M Miller
Journal:  EMBO J       Date:  1984-05       Impact factor: 11.598

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  15 in total

1.  Cytoplasmic ribosomal protein S15a from Brassica napus: molecular cloning and developmental expression in mitotically active tissues.

Authors:  P C Bonham-Smith; T L Oancia; M M Moloney
Journal:  Plant Mol Biol       Date:  1992-03       Impact factor: 4.076

2.  The 5' splice site: phylogenetic evolution and variable geometry of association with U1RNA.

Authors:  M Jacob; H Gallinaro
Journal:  Nucleic Acids Res       Date:  1989-03-25       Impact factor: 16.971

3.  Codon usage in yeast: cluster analysis clearly differentiates highly and lowly expressed genes.

Authors:  P M Sharp; T M Tuohy; K R Mosurski
Journal:  Nucleic Acids Res       Date:  1986-07-11       Impact factor: 16.971

4.  The gene for yeast ribosomal protein S31 contains an intron in the leader sequence.

Authors:  R T Nieuwint; C M Molenaar; J H van Bommel; M M van Raamsdonk-Duin; W H Mager; R J Planta
Journal:  Curr Genet       Date:  1985       Impact factor: 3.886

5.  Structure and expression of the Saccharomyces cerevisiae CRY1 gene: a highly conserved ribosomal protein gene.

Authors:  J C Larkin; J R Thompson; J L Woolford
Journal:  Mol Cell Biol       Date:  1987-05       Impact factor: 4.272

6.  Tripartite upstream promoter element essential for expression of Saccharomyces cerevisiae ribosomal protein genes.

Authors:  M O Rotenberg; J L Woolford
Journal:  Mol Cell Biol       Date:  1986-02       Impact factor: 4.272

7.  Molecular genetics of cryptopleurine resistance in Saccharomyces cerevisiae: expression of a ribosomal protein gene family.

Authors:  A G Paulovich; J R Thompson; J C Larkin; Z Li; J L Woolford
Journal:  Genetics       Date:  1993-11       Impact factor: 4.562

Review 8.  Synthesis of ribosomes in Saccharomyces cerevisiae.

Authors:  J R Warner
Journal:  Microbiol Rev       Date:  1989-06

9.  Intercistronic group III introns in polycistronic ribosomal protein operons of chloroplasts.

Authors:  J K Stevenson; R G Drager; D W Copertino; D A Christopher; K P Jenkins; G Yepiz-Plascencia; R B Hallick
Journal:  Mol Gen Genet       Date:  1991-08

10.  Cloning, expression and partial characterization of a gene encoding the S15a ribosomal protein of Taenia solium.

Authors:  Lucía Jiménez; Arturo Becerra; Abraham Landa
Journal:  Parasitol Res       Date:  2004-02-04       Impact factor: 2.289

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