Literature DB >> 3975616

Dynamics and conformational energetics of a peptide hormone: vasopressin.

A T Hagler, D J Osguthorpe, P Dauber-Osguthorpe, J C Hempel.   

Abstract

A theoretical methodology for use in conjunction with experiment was applied to the neurohypophyseal hormone lysine vasopressin for elucidation of its accessible molecular conformations and associated flexibility, conformational transitions, and dynamics. Molecular dynamics and energy minimization techniques make possible a description of the conformational properties of a peptide in terms of the precise positions of atoms, their fluctuations in time, and the interatomic forces acting on them. Analysis of the dynamic trajectory of lysine vasopressin shows the ability of a flexible peptide hormone to undergo spontaneous conformational transitions. The excursions of an individual phenylalanine residue exemplify the dynamic flexibility and multiple conformational states available to small peptide hormones and their component residues, even within constraints imposed by a cyclic hexapeptide ring.

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Year:  1985        PMID: 3975616     DOI: 10.1126/science.3975616

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  16 in total

1.  Molecular dynamics simulation by atomic mass weighting.

Authors:  B Mao; A R Friedman
Journal:  Biophys J       Date:  1990-09       Impact factor: 4.033

2.  Modeling of the three-dimensional structure of luffin-alpha and its simulated reaction with the substrate oligoribonucleotide GAGA.

Authors:  R S Chen; H W Leung; Y C Dong; R N Wong
Journal:  J Protein Chem       Date:  1996-10

Review 3.  Biomolecular force fields: where have we been, where are we now, where do we need to go and how do we get there?

Authors:  Pnina Dauber-Osguthorpe; A T Hagler
Journal:  J Comput Aided Mol Des       Date:  2018-11-30       Impact factor: 3.686

4.  A fast and efficient method to generate biologically relevant conformations.

Authors:  G Klebe; T Mietzner
Journal:  J Comput Aided Mol Des       Date:  1994-10       Impact factor: 3.686

5.  Novel sst2-selective somatostatin agonists. Three-dimensional consensus structure by NMR.

Authors:  Christy Rani R Grace; Judit Erchegyi; Steven C Koerber; Jean Claude Reubi; Jean Rivier; Roland Riek
Journal:  J Med Chem       Date:  2006-07-27       Impact factor: 7.446

6.  Identification of stabilized dynorphin derivatives for suppressing tolerance in morphine-dependent rats.

Authors:  Suliman I Al-Fayoumi; Boglarka Brugos; Vikram Arya; Esther Mulder; Barbel Eppler; Andre P Mauderli; Günther Hochhaus
Journal:  Pharm Res       Date:  2004-08       Impact factor: 4.200

7.  Ring size in octreotide amide modulates differently agonist versus antagonist binding affinity and selectivity.

Authors:  Christy Rani R Grace; Judit Erchegyi; Manoj Samant; Renzo Cescato; Veronique Piccand; Roland Riek; Jean Claude Reubi; Jean E Rivier
Journal:  J Med Chem       Date:  2008-04-12       Impact factor: 7.446

8.  Ring size of somatostatin analogues (ODT-8) modulates receptor selectivity and binding affinity.

Authors:  Judit Erchegyi; Christy Rani R Grace; Manoj Samant; Renzo Cescato; Veronique Piccand; Roland Riek; Jean Claude Reubi; Jean E Rivier
Journal:  J Med Chem       Date:  2008-04-12       Impact factor: 7.446

9.  Aptamer based surface enhanced Raman scattering detection of vasopressin using multilayer nanotube arrays.

Authors:  Yun Suk Huh; David Erickson
Journal:  Biosens Bioelectron       Date:  2009-10-07       Impact factor: 10.618

10.  Molecular dynamics simulation of the renin inhibitor H142 in water.

Authors:  O Teleman; M Lindberg; S Engström
Journal:  J Comput Aided Mol Des       Date:  1991-06       Impact factor: 3.686

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