Literature DB >> 3963370

A small-scale five-hour procedure for isolating multiple samples of CsCl-purified DNA: application to isolations from mammalian, insect, higher plant, algal, yeast, and bacterial sources.

D P Weeks, N Beerman, O M Griffith.   

Abstract

A rapid and simple procedure is described for obtaining CsCl-purified DNA from multiple small samples of cells or tissue. The DNA is recovered in a high-molecular-weight form (greater than or equal to 50 kb) that is readily cleaved with restriction enzymes. Sufficient quantities of DNA (10-50 micrograms) are recovered to allow multiple analyses by Southern blotting and most cloning procedures. The isolation procedure involves addition of intact cells or powders of frozen tissues directly to a simple lysis buffer containing detergent (sodium dodecyl sulfate or sodium sarcosinate) and high concentrations of EDTA. Ultra-high-speed centrifugation of CsCl gradients allows the isolation of DNA from 10 different samples in as little as 5 h. Applications are described for mammalian cells (HeLa cells), insect tissues (Drosophila melanogaster adults and pupa, Manduca sexta pupa, and Musca domestica pupa), higher plant tissues (Vicia faba leaves and meristems), algal cells (walled and wall-less Chlamydomonas reinhardi), yeast cells (Saccharomyces cerevisiae), and bacterial cells (Escherichia coli spheroplasts for preparation of both chromosomal and plasmid DNA). The procedure can be scaled up with larger sample sizes and longer centrifugation times to provide bulk quantities of DNA.

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Year:  1986        PMID: 3963370     DOI: 10.1016/0003-2697(86)90423-9

Source DB:  PubMed          Journal:  Anal Biochem        ISSN: 0003-2697            Impact factor:   3.365


  56 in total

1.  Characterization of chloroplast psbA transformants of Chlamydomonas reinhardtii with impaired processing of a precursor of a photosystem II reaction center protein, D1.

Authors:  A Hatano-Iwasaki; J Minagawa; Y Inoue; Y Takahashi
Journal:  Plant Mol Biol       Date:  2000-01       Impact factor: 4.076

2.  Release from post-transcriptional gene silencing by cell proliferation in transgenic tobacco plants: possible mechanism for noninheritance of the silencing.

Authors:  Ichiro Mitsuhara; Naomi Shirasawa-Seo; Takayoshi Iwai; Shigeo Nakamura; Ryoso Honkura; Yuko Ohashi
Journal:  Genetics       Date:  2002-01       Impact factor: 4.562

3.  FAR1, a negative regulatory locus required for the repression of the nitrate reductase gene in Chlamydomonas reinhardtii.

Authors:  D Zhang; P A Lefebvre
Journal:  Genetics       Date:  1997-05       Impact factor: 4.562

4.  Fingerprinting microbial assemblages from the oxic/anoxic chemocline of the Black Sea.

Authors:  Costantino Vetriani; Hiep V Tran; Lee J Kerkhof
Journal:  Appl Environ Microbiol       Date:  2003-11       Impact factor: 4.792

5.  Trichome Development in Arabidopsis thaliana. II. Isolation and Complementation of the GLABROUS1 Gene.

Authors:  P. L. Herman; M. D. Marks
Journal:  Plant Cell       Date:  1989-11       Impact factor: 11.277

6.  rRNA genes from the lower chordate Herdmania momus: structural similarity with higher eukaryotes.

Authors:  B M Degnan; J Yan; C J Hawkins; M F Lavin
Journal:  Nucleic Acids Res       Date:  1990-12-11       Impact factor: 16.971

7.  13C-carrier DNA shortens the incubation time needed to detect benzoate-utilizing denitrifying bacteria by stable-isotope probing.

Authors:  E Gallagher; L McGuinness; C Phelps; L Y Young; L J Kerkhof
Journal:  Appl Environ Microbiol       Date:  2005-09       Impact factor: 4.792

8.  Polymorphisms in the human X-linked pyruvate dehydrogenase E1 alpha gene.

Authors:  H H Dahl; W M Hutchison; Z Guo; S M Forrest; L L Hansen
Journal:  Hum Genet       Date:  1991-05       Impact factor: 4.132

9.  Transcription of novel genes, including a gene linked to the mating-type locus, induced by Chlamydomonas fertilization.

Authors:  P J Ferris; U W Goodenough
Journal:  Mol Cell Biol       Date:  1987-07       Impact factor: 4.272

10.  Chloroplast-encoded chlB is required for light-independent protochlorophyllide reductase activity in Chlamydomonas reinhardtii.

Authors:  J Li; M Goldschmidt-Clermont; M P Timko
Journal:  Plant Cell       Date:  1993-12       Impact factor: 11.277

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