Literature DB >> 3951541

Location of exit channel for nascent protein in 80S ribosome.

R A Milligan, P N Unwin.   

Abstract

Ribosomes crystallize on endoplasmic reticulum membranes in oocytes of the southern Italian lizard, Lacerta sicula, during winter. Electron crystallographic studies of the crystals have been made to elucidate the arrangement of the ribosomal subunits on the membrane surface. We have now obtained more extensive and better ordered crystals of the same habit, grown from chick embryo ribosomes, and report here on their native structure preserved by rapid freezing of the crystals in thin aqueous films. The three-dimensional map reveals new details of the protein and ribosomal RNA distribution within the ribosome. Most striking is a region of low density within the large subunit which extends from the subunit interface towards an area on the membrane-facing surface identified by others as the exit site of the nascent protein. This region of low density appears to delineate the path taken by the growing polypeptide through the ribosome to the external surface.

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Year:  1986        PMID: 3951541     DOI: 10.1038/319693a0

Source DB:  PubMed          Journal:  Nature        ISSN: 0028-0836            Impact factor:   49.962


  16 in total

1.  The conformation of a nascent polypeptide inside the ribosome tunnel affects protein targeting and protein folding.

Authors:  Janine H Peterson; Cheryl A Woolhead; Harris D Bernstein
Journal:  Mol Microbiol       Date:  2010-08-20       Impact factor: 3.501

2.  Ribosome exit tunnel can entropically stabilize alpha-helices.

Authors:  Guy Ziv; Gilad Haran; D Thirumalai
Journal:  Proc Natl Acad Sci U S A       Date:  2005-12-15       Impact factor: 11.205

Review 3.  Large facilities and the evolving ribosome, the cellular machine for genetic-code translation.

Authors:  Ada Yonath
Journal:  J R Soc Interface       Date:  2009-08-05       Impact factor: 4.118

4.  Ribosome release factor RF4 and termination factor RF3 are involved in dissociation of peptidyl-tRNA from the ribosome.

Authors:  V Heurgué-Hamard; R Karimi; L Mora; J MacDougall; C Leboeuf; G Grentzmann; M Ehrenberg; R H Buckingham
Journal:  EMBO J       Date:  1998-02-02       Impact factor: 11.598

5.  The path of the growing peptide chain through the 23S rRNA in the 50S ribosomal subunit; a comparative cross-linking study with three different peptide families.

Authors:  K M Choi; R Brimacombe
Journal:  Nucleic Acids Res       Date:  1998-02-15       Impact factor: 16.971

6.  Mapping the path of the nascent peptide chain through the 23S RNA in the 50S ribosomal subunit.

Authors:  K Stade; N Jünke; R Brimacombe
Journal:  Nucleic Acids Res       Date:  1995-07-11       Impact factor: 16.971

7.  Negatively-stained polysomes on rough microsome vesicles viewed by electron microscopy: further evidence regarding the orientation of attached ribosomes.

Authors:  A K Christensen
Journal:  Cell Tissue Res       Date:  1994-06       Impact factor: 5.249

Review 8.  Heat shock proteins: molecular chaperones of protein biogenesis.

Authors:  E A Craig; B D Gambill; R J Nelson
Journal:  Microbiol Rev       Date:  1993-06

9.  The plasticity of a translation arrest motif yields insights into nascent polypeptide recognition inside the ribosome tunnel.

Authors:  Mee-Ngan Yap; Harris D Bernstein
Journal:  Mol Cell       Date:  2009-04-24       Impact factor: 17.970

10.  Collective dynamics of the ribosomal tunnel revealed by elastic network modeling.

Authors:  Ozge Kurkcuoglu; Zeynep Kurkcuoglu; Pemra Doruker; Robert L Jernigan
Journal:  Proteins       Date:  2009-06
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