Literature DB >> 3931642

Correct pK values for dissociation constant of carbonic acid lower the reported Km values of ribulose bisphosphate carboxylase to half. Presentation of a nomograph and an equation for determining the pK values.

A Yokota, S Kitaoka.   

Abstract

In the assay of ribulose 1,5-bisphosphate carboxylase/oxygenase (Rubisco) in vitro, the concentration of CO2, the substrate of the enzyme, has been calculated from the amount of sodium bicarbonate added to the assay mixture with a dissociation constant of carbonic acid in pure water, 6.35 to 6.37. However, Rubisco is generally assayed at ionic strength of 0.1 to 0.2 M, where the dissociation constant decreases up to 6.06. The decrease of this level of the constant reduces the calculated CO2 concentration in the assay mixture to about half and accordingly the Kms of Rubisco for CO2 reported so far are not correct. The present report presents a nomograph and an equation, from which dissociation constants of carbonic acid in the presence of various concentrations of salts can be easily calculated.

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Year:  1985        PMID: 3931642     DOI: 10.1016/0006-291x(85)90200-1

Source DB:  PubMed          Journal:  Biochem Biophys Res Commun        ISSN: 0006-291X            Impact factor:   3.575


  24 in total

1.  Stimulation by Light of Rapid pH Regulation in the Chloroplast Stroma in Vivo as Indicated by CO2 Solubilization in Leaves.

Authors:  M. Hauser; H. Eichelmann; V. Oja; U. Heber; A. Laisk
Journal:  Plant Physiol       Date:  1995-07       Impact factor: 8.340

2.  Light-dependent pH changes in leaves of C3 plants : I. Recording pH changes in various cellular compartments by fluorescent probes.

Authors:  Z H Yin; S Neimanis; U Wagner; U Heber
Journal:  Planta       Date:  1990-09       Impact factor: 4.116

3.  Ribulose-1,5-bisphosphate carboxylase/oxygenase from thermophilic cyanobacterium Thermosynechococcus elongatus.

Authors:  Beata Gubernator; Rafal Bartoszewski; Jaroslaw Kroliczewski; Guenter Wildner; Andrzej Szczepaniak
Journal:  Photosynth Res       Date:  2007-10-06       Impact factor: 3.573

4.  Temperature responses of the Rubisco maximum carboxylase activity across domains of life: phylogenetic signals, trade-offs, and importance for carbon gain.

Authors:  J Galmés; M V Kapralov; L O Copolovici; C Hermida-Carrera; Ü Niinemets
Journal:  Photosynth Res       Date:  2014-12-17       Impact factor: 3.573

5.  Photosynthetic Fractionation of the Stable Isotopes of Oxygen and Carbon.

Authors:  R. D. Guy; M. L. Fogel; J. A. Berry
Journal:  Plant Physiol       Date:  1993-01       Impact factor: 8.340

6.  The state of the photosynthetic apparatus in leaves as analyzed by rapid gas exchange and optical methods: the pH of the chloroplast stroma and activation of enzymes in vivo.

Authors:  A Laisk; V Oja; O Kiirats; K Raschke; U Heber
Journal:  Planta       Date:  1989-03       Impact factor: 4.116

7.  Rubisco in planta kcat is regulated in balance with photosynthetic electron transport.

Authors:  H Eichelmann; E Talts; V Oja; E Padu; A Laisk
Journal:  J Exp Bot       Date:  2009-08-06       Impact factor: 6.992

8.  Structural and functional similarities between a ribulose-1,5-bisphosphate carboxylase/oxygenase (RuBisCO)-like protein from Bacillus subtilis and photosynthetic RuBisCO.

Authors:  Yohtaro Saito; Hiroki Ashida; Tomoko Sakiyama; Nicole Tandeau de Marsac; Antoine Danchin; Agnieszka Sekowska; Akiho Yokota
Journal:  J Biol Chem       Date:  2009-03-11       Impact factor: 5.157

9.  Ribulose-1,5-bisphosphate Carboxylase/Oxygenase content, assimilatory charge, and mesophyll conductance in leaves

Authors: 
Journal:  Plant Physiol       Date:  1999-01       Impact factor: 8.340

10.  Rates of glycolate synthesis and metabolism during photosynthesis of Euglena and microalgae grown on low CO2.

Authors:  A Yokota; S Kitaoka
Journal:  Planta       Date:  1987-02       Impact factor: 4.116

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