Literature DB >> 3930243

An estimation of the equivalent solution dielectric constant in the active-site cavity of metalloenzymes. Dependence of carboxylate-metal-ion complex stabilities on the polarity of mixed aqueous/organic solvents.

H Sigel, R B Martin, R Tribolet, U K Häring, R Malini-Balakrishnan.   

Abstract

The stability constants of the 1:1 complexes between Cu2+ and Zn2+ with formate, acetate and several phenylalkanecarboxylates, i.e. C6H5-(CH2)n-COO- with n = 0 to 5, are summarized for water, 50% aqueous ethanol and 50% aqueous dioxane (I = 0.1 M; 25 degrees C): Complex stability depends upon carboxylate group basicity. The influence of varying amounts of ethanol or dioxane (up to 90%) on the stability of the Cu2+ and Zn2+ (M2+) complexes with formate and acetate (CA) was measured by potentiometric pH titrations. The values for pKHH(CA) and log KMM(CA) increase, as expected, with increasing amounts of the organic solvents, i.e. with decreasing solvent polarity. The changes in the equilibrium constants are also evaluated with regard to the mole fractions of the organic solvents and the corresponding dielectric constants. These results may be used to estimate for low dielectric cavities in proteins the equivalent solution dielectric constant on the basis of enhanced carboxylate basicity or metal ion binding capability (method 1). Furthermore, the measured stability constants are used for comparisons of the coordination tendency of carboxylate ligands towards zinc(II)-metalloenzymes (method 2); in this way the equivalent solution dielectric constants in the active-site cavities of bovine carbonic anhydrase and carboxypeptidase A are estimated: the values are of the order of 35 and 70, respectively. This method seems to be generally applicable to metalloproteins.

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Year:  1985        PMID: 3930243     DOI: 10.1111/j.1432-1033.1985.tb09180.x

Source DB:  PubMed          Journal:  Eur J Biochem        ISSN: 0014-2956


  6 in total

1.  A soft-modeling approach to interpret thermodynamic and conformational transitions of polynucleotides.

Authors:  A de Juan; A Izquierdo-Ridorsa; R Tauler; G Fonrodona; E Casassas
Journal:  Biophys J       Date:  1997-12       Impact factor: 4.033

2.  Biocatalysis in nonaqueous media. Patents and literature.

Authors:  J S Dordick
Journal:  Appl Biochem Biotechnol       Date:  1988-10       Impact factor: 2.926

Review 3.  Coordination Chemistry of Nucleotides and Antivirally Active Acyclic Nucleoside Phosphonates, including Mechanistic Considerations.

Authors:  Astrid Sigel; Helmut Sigel; Roland K O Sigel
Journal:  Molecules       Date:  2022-04-19       Impact factor: 4.927

4.  DFT studies of the ring-opening mechanism of SB-3CT, a potent inhibitor of matrix metalloproteinase 2.

Authors:  Peng Tao; Jed F Fisher; Shahriar Mobashery; H Bernhard Schlegel
Journal:  Org Lett       Date:  2009-06-18       Impact factor: 6.005

Review 5.  Self-association of nucleotides. Effects of protonation and metal ion coordination.

Authors:  H Sigel
Journal:  Biol Trace Elem Res       Date:  1989 Jul-Sep       Impact factor: 3.738

6.  Equilibrium Studies of Dibutyltin(IV)-Zwitterionic Buffer Complexation.

Authors:  M A El-Gahami; H M Albishri
Journal:  J Solution Chem       Date:  2013-10-26       Impact factor: 1.677

  6 in total

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