Literature DB >> 3900037

Comparison of the regulatory regions of ilvGEDA operons from several enteric organisms.

E Harms, J H Hsu, C S Subrahmanyam, H E Umbarger.   

Abstract

The nucleotide sequence preceding the ilvGEDA operon has been examined and compared in five enteric organisms. The sequence in Escherichia coli B was identical to the earlier-described strain K-12 sequence. The sequences of Salmonella typhimurium and Klebsiella aerogenes were remarkably similar to that of E. coli and identical in that part of the leader region that specified the putative 32-amino-acid peptide. Thus, identical secondary structures could be postulated for the leaders of all three organisms, and regulation of operon expression could be like that postulated earlier for E. coli. Different secondary structures had to be postulated for the leader transcripts of Edwardsiella tarda and Serratia marcescens. Control of attenuation of the operon in these organisms by the level of leucyl tRNA could be explained only if ribosome stalling occurred at a single leucine codon. In both organisms, that single leucine codon is the rarely used CUA rather than the CUG that is in E. coli, S. typhimurium, and K. aerogenes.

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Year:  1985        PMID: 3900037      PMCID: PMC214231          DOI: 10.1128/jb.164.1.207-216.1985

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  33 in total

1.  Detection of specific sequences among DNA fragments separated by gel electrophoresis.

Authors:  E M Southern
Journal:  J Mol Biol       Date:  1975-11-05       Impact factor: 5.469

2.  Transformation of Salmonella typhimurium by plasmid deoxyribonucleic acid.

Authors:  E M Lederberg; S N Cohen
Journal:  J Bacteriol       Date:  1974-09       Impact factor: 3.490

3.  Isoleucine and valine metabolism in Escherichia coli. 18. Induction of acetohydroxy acid isomeroreductase.

Authors:  B Ratzkin; S Arfin; H E Umbarger
Journal:  J Bacteriol       Date:  1972-10       Impact factor: 3.490

4.  Resistance to catabolite repression of histidase and proline oxidase during nitrogen-limited growth of Klebsiella aerogenes.

Authors:  M J Prival; B Magasanik
Journal:  J Biol Chem       Date:  1971-10-25       Impact factor: 5.157

5.  Improved estimation of secondary structure in ribonucleic acids.

Authors:  I Tinoco; P N Borer; B Dengler; M D Levin; O C Uhlenbeck; D M Crothers; J Bralla
Journal:  Nat New Biol       Date:  1973-11-14

6.  Analysis of restriction fragments of T7 DNA and determination of molecular weights by electrophoresis in neutral and alkaline gels.

Authors:  M W McDonell; M N Simon; F W Studier
Journal:  J Mol Biol       Date:  1977-02-15       Impact factor: 5.469

7.  In vitro synthesis of the E3 immunity protein directed by Col E3 plasmid deoxyribonucleic acid.

Authors:  J Sidikaro; N Masayasu
Journal:  J Biol Chem       Date:  1975-02-10       Impact factor: 5.157

8.  Polarity and the regulation of the ilv gene cluster in Escherichia coli strain K-12.

Authors:  J M Smith; D E Smolin; H E Umbarger
Journal:  Mol Gen Genet       Date:  1976-10-18

Review 9.  Genetics of the Enterobacteriaceae. C. Molecular relationships among members of the Enterobacteriaceae.

Authors:  D J Brenner; S Falkow
Journal:  Adv Genet       Date:  1971       Impact factor: 1.944

10.  Multivalent repression and genetic depression of isoleucine-valine biosynthetic enzymes in Serratia marcescens.

Authors:  M Kisumi; S Komatsubara; I Chibata
Journal:  J Bacteriol       Date:  1971-09       Impact factor: 3.490

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  16 in total

1.  Mutations replacing the leucine codons or altering the length of the amino acid-coding portion of the ilvGMEDA leader region of Escherichia coli.

Authors:  J W Chen; E Harms; H E Umbarger
Journal:  J Bacteriol       Date:  1991-04       Impact factor: 3.490

2.  Point mutations in the regulatory region of the ilvGMEDA operon of Escherichia coli K-12.

Authors:  R P Lawther
Journal:  J Bacteriol       Date:  1989-02       Impact factor: 3.490

3.  Evolution of aromatic amino acid biosynthesis and application to the fine-tuned phylogenetic positioning of enteric bacteria.

Authors:  S Ahmad; W G Weisburg; R A Jensen
Journal:  J Bacteriol       Date:  1990-02       Impact factor: 3.490

4.  Physiological implications of the substrate specificities of acetohydroxy acid synthases from varied organisms.

Authors:  N Gollop; B Damri; D M Chipman; Z Barak
Journal:  J Bacteriol       Date:  1990-06       Impact factor: 3.490

5.  Translational coupling between the ilvD and ilvA genes of Escherichia coli.

Authors:  E Harms; E Higgins; J W Chen; H E Umbarger
Journal:  J Bacteriol       Date:  1988-10       Impact factor: 3.490

6.  Role of codon choice in the leader region of the ilvGMEDA operon of Serratia marcescens.

Authors:  E Harms; H E Umbarger
Journal:  J Bacteriol       Date:  1987-12       Impact factor: 3.490

Review 7.  Linkage map of Salmonella typhimurium, edition VII.

Authors:  K E Sanderson; J R Roth
Journal:  Microbiol Rev       Date:  1988-12

8.  Effects of deletion and insertion mutations in the ilvM gene of Escherichia coli.

Authors:  M F Lu; H E Umbarger
Journal:  J Bacteriol       Date:  1987-02       Impact factor: 3.490

9.  Regulation of Caulobacter crescentus ilvBN gene expression.

Authors:  J C Tarleton; J Malakooti; B Ely
Journal:  J Bacteriol       Date:  1994-06       Impact factor: 3.490

10.  Comparative genomic analysis of T-box regulatory systems in bacteria.

Authors:  Alexey G Vitreschak; Andrei A Mironov; Vassily A Lyubetsky; Mikhail S Gelfand
Journal:  RNA       Date:  2008-04       Impact factor: 4.942

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