Literature DB >> 388429

A 3.0-A resolution study of nucleotide complexes with aspartate carbamoyltransferase.

R B Honzatko, H L Monaco, W N Lipscomb.   

Abstract

The binding sites of CTP, CDP, 5-BrCTP, and ATP to the allosteric site of aspartate carbamoyltransferase (carbamoylphosphate:L-aspartate carbamoyltransferase, EC 2.1.3.2) have been found in electron-density maps obtained at about 3 A resolution from x-ray diffraction studies of single crystals. The activator ATP binds in the anti conformation, whereas the inhibitor 5-BrCTP binds in the syn conformation. Both activator and inhibitor bind to the same local region of the enzyme. All of the cytidine nucleotides show important interactions of the base with the protein. The triphosphate conformations are similar, whereas the terminal phosphate of CDP occupies the site of the gamma-phosphate of CTP, thus implying a protein-nucleotide interaction at this site. These results are then related to biochemical studies.

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Year:  1979        PMID: 388429      PMCID: PMC413088          DOI: 10.1073/pnas.76.10.5105

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  25 in total

1.  Nuclear magnetic resonance spectra of adenosine di- and triphosphate. II. Effect of complexing with divalent metal ions.

Authors:  M COHN; T R HUGHES
Journal:  J Biol Chem       Date:  1962-01       Impact factor: 5.157

2.  The enzymology of control by feedback inhibition.

Authors:  J C GERHART; A B PARDEE
Journal:  J Biol Chem       Date:  1962-03       Impact factor: 5.157

3.  ENZYMATIC SYNTHESIS OF DEOXYRIBONUCLEIC ACID. III. THE INCORPORATION OF PYRIMIDINE AND PURINE ANALOGUES INTO DEOXYRIBONUCLEIC ACID.

Authors:  M J Bessman; I R Lehman; J Adler; S B Zimmerman; E S Simms; A Kornberg
Journal:  Proc Natl Acad Sci U S A       Date:  1958-07-15       Impact factor: 11.205

4.  Allosteric activation of aspartate transcarbamylase with a fluorescent nucleotide analogue: linear-benzo-ATP.

Authors:  P VanDerLijn; J R Barrio; N J Leonard
Journal:  J Biol Chem       Date:  1978-12-25       Impact factor: 5.157

5.  Asymmetry of binding and physical assignments of CTP and ATP sites in aspartate transcarbamoylase.

Authors:  P Suter; J P Rosenbusch
Journal:  J Biol Chem       Date:  1977-11-25       Impact factor: 5.157

6.  Interaction of aspartate transcarbamylase with regulatory nucleotides.

Authors:  C W Gray; M J Chamberlin; D M Gray
Journal:  J Biol Chem       Date:  1973-09-10       Impact factor: 5.157

7.  The role of coordinated water in metal ion--adenine ring binding in complexes of adenosine triphosphate.

Authors:  G P Kuntz; T A Glassman; C Cooper; T J Swift
Journal:  Biochemistry       Date:  1972-02-15       Impact factor: 3.162

8.  Agonist-mediated changes of the acetylcholine receptor in its membrane environment.

Authors:  F J Barrantes
Journal:  J Mol Biol       Date:  1978-09-05       Impact factor: 5.469

9.  An effect of enzyme and ligand concentration on the state of aggregation of aspartate transcarbamylase of E. coli: I. The binding of CTP and ATP to the enzyme.

Authors:  R A Cook; J A Milne
Journal:  Can J Biochem       Date:  1977-04

10.  Regulation of aspartate carbamoyltransferase of Escherichia coli by the interrelationship of magnesium and nucleotides.

Authors:  R I Christopherson; L R Finch
Journal:  Biochim Biophys Acta       Date:  1977-03-15
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  5 in total

1.  Mapping structural perturbations in Escherichia coli aspartate transcarbamylase by medium resolution hydrogen exchange.

Authors:  D S Burz; N M Allewell
Journal:  Biophys J       Date:  1986-01       Impact factor: 4.033

2.  Amino acid sequence of the catalytic subunit of aspartate transcarbamoylase from Escherichia coli.

Authors:  W H Konigsberg; L Henderson
Journal:  Proc Natl Acad Sci U S A       Date:  1983-05       Impact factor: 11.205

3.  Nucleotide sequence of the structural gene (pyrB) that encodes the catalytic polypeptide of aspartate transcarbamoylase of Escherichia coli.

Authors:  T A Hoover; W D Roof; K F Foltermann; G A O'Donovan; D A Bencini; J R Wild
Journal:  Proc Natl Acad Sci U S A       Date:  1983-05       Impact factor: 11.205

4.  Metal cation influence on activity and regulation of aspartate carbamoyltransferase.

Authors:  R B Honzatko; A M Lauritzen; W N Lipscomb
Journal:  Proc Natl Acad Sci U S A       Date:  1981-02       Impact factor: 11.205

5.  In the presence of CTP, UTP becomes an allosteric inhibitor of aspartate transcarbamoylase.

Authors:  J R Wild; S J Loughrey-Chen; T S Corder
Journal:  Proc Natl Acad Sci U S A       Date:  1989-01       Impact factor: 11.205

  5 in total

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