Literature DB >> 3873254

Spontaneous epimerization of (S)-deoxycoformycin and interaction of (R)-deoxycoformycin, (S)-deoxycoformycin, and 8-ketodeoxycoformycin with adenosine deaminase.

V L Schramm, D C Baker.   

Abstract

(R)-Deoxycoformycin (pentostatin), (S)-deoxycoformycin, and 8-ketodeoxycoformycin were compared as inhibitors of calf intestine adenosine deaminase. In contrast to (R)-deoxycoformycin, which had been demonstrated as a tight-binding inhibitor with a dissociation constant of 2.5 X 10(-12) M [Agarwal, R. P., Spector, T., & Parks, R. E., Jr. (1977) Biochem. Pharmacol. 26, 359-367], (S)-deoxycoformycin and 8-ketodeoxycoformycin are slope-linear competitive inhibitors with respect to adenosine. The kinetic constants are 33 microM for inhibition by (S)-deoxycoformycin, 43 microM for 8-ketodeoxycoformycin, and 16 microM for the Km for adenosine. The stereochemistry of carbon 8 of the diazepine ring therefore causes a (1.3 X 10(7]-fold change in the affinity for the enzyme which is specific for the R configuration. This difference is attributed to an induced conformational change which cannot be initiated by the S isomer or the 8-keto analogue of (R)-deoxycoformycin. The studies were complicated by the need to remove traces of tight-binding inhibitor(s) from (S)-deoxycoformycin, since as little as 0.001% of the R isomer causes significant inhibition. The R and S isomers of deoxycoformycin are unstable in neutral or mildly acidic aqueous solutions. Isomerization of the secondary hydroxyl at carbon 8 of the diazepine ring is one of the reactions, resulting in S to R and R to S conversions for deoxycoformycins. Opening of the aglycon is also a major reaction. The tight-binding inhibitor generated from (S)-deoxycoformycin was identified as (R)-deoxycoformycin by high-pressure liquid chromatography, spectroscopy, circular dichroism, and chemical criteria.(ABSTRACT TRUNCATED AT 250 WORDS)

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Year:  1985        PMID: 3873254     DOI: 10.1021/bi00324a016

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  5 in total

1.  Characterization of the coformycin biosynthetic gene cluster in Streptomyces kaniharaensis.

Authors:  Daan Ren; Mark W Ruszczycky; Yeonjin Ko; Shao-An Wang; Yasushi Ogasawara; Minje Kim; Hung-Wen Liu
Journal:  Proc Natl Acad Sci U S A       Date:  2020-04-29       Impact factor: 11.205

2.  Ribocation transition state capture and rebound in human purine nucleoside phosphorylase.

Authors:  Mahmoud Ghanem; Andrew S Murkin; Vern L Schramm
Journal:  Chem Biol       Date:  2009-09-25

3.  L-Enantiomers of transition state analogue inhibitors bound to human purine nucleoside phosphorylase.

Authors:  Agnes Rinaldo-Matthis; Andrew S Murkin; Udupi A Ramagopal; Keith Clinch; Simon P H Mee; Gary B Evans; Peter C Tyler; Richard H Furneaux; Steven C Almo; Vern L Schramm
Journal:  J Am Chem Soc       Date:  2007-12-23       Impact factor: 15.419

4.  Synthesis of 5'-methylthio coformycins: specific inhibitors for malarial adenosine deaminase.

Authors:  Peter C Tyler; Erika A Taylor; Richard F G Fröhlich; Vern L Schramm
Journal:  J Am Chem Soc       Date:  2007-05-08       Impact factor: 15.419

Review 5.  Enzymatic Transition States and Drug Design.

Authors:  Vern L Schramm
Journal:  Chem Rev       Date:  2018-10-18       Impact factor: 60.622

  5 in total

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