Literature DB >> 3870930

The intergenic region between the Vicia faba chloroplast tRNA(CAALeu) and tRNA(UAALeu) genes contains a partial copy of the split tRNA(UAALeu) gene.

G Bonnard1, J H Weil, A Steinmetz.   

Abstract

A cluster of three tRNA genes located on fragment Bam6a from Vicia faba chloroplast DNA has been sequenced: it contains the genes for tRNA(CAALeu), tRNA(UAALeu) and tRNA(Phe). The two tRNA(Leu) genes are separated by 443 bp and are transcribed divergently from different DNA strands. The intergenic region contains a series of short repeats and a partial copy of the split tRNA(UAALeu) gene which includes 100 bp of the 5' flanking region, 35 bp of the 5'exon and the first 42 bp of the intron. It is possible that some of these duplications occurred upon the rearrangement of the two tRNA(Leu) genes in broad bean (and in pea) or upon the deletion of one copy of the inverted repeat, since in all other higher plant chloroplast genomes studied so far these two tRNA(Leu) genes are located far apart on the genome, one being in the inverted repeat region, the other one in the large single copy region. The tRNA(Phe) and tRNA(UAALeu) are encoded by the same DNA strand, and separated by 110 bp.

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Year:  1985        PMID: 3870930     DOI: 10.1007/bf00421614

Source DB:  PubMed          Journal:  Curr Genet        ISSN: 0172-8083            Impact factor:   3.886


  19 in total

1.  Transfer RNA genes ofZea mays chloroplast DNA.

Authors:  R F Selden; A Steinmetz; L McIntosh; L Bogorad; G Burkard; M Mubumbila; M Kuntz; E J Crouse; J H Weil
Journal:  Plant Mol Biol       Date:  1983-05       Impact factor: 4.076

2.  The localization and orientation of specific genes in the chloroplast chromosome of Vicia faba.

Authors:  K Ko; N A Straus; J P Wfliams
Journal:  Curr Genet       Date:  1984-07       Impact factor: 3.886

3.  Mapping the Chloroplast DNA of Vicia faba.

Authors:  K Ko; N A Straus; J P Williams
Journal:  Curr Genet       Date:  1983-07       Impact factor: 3.886

4.  Transfer RNAs and tRNA genes of Vicia faba chloroplasts.

Authors:  M Mubumbila; E J Crouse; J H Weil
Journal:  Curr Genet       Date:  1984-07       Impact factor: 3.886

5.  Supercoiled circular DNA-protein complex in Escherichia coli: purification and induced conversion to an opern circular DNA form.

Authors:  D B Clewell; D R Helinski
Journal:  Proc Natl Acad Sci U S A       Date:  1969-04       Impact factor: 11.205

6.  Chloroplast DNA rearrangements are more frequent when a large inverted repeat sequence is lost.

Authors:  J D Palmer; W F Thompson
Journal:  Cell       Date:  1982-06       Impact factor: 41.582

7.  Overlapping divergent genes in the maize chloroplast chromosome and in vitro transcription of the gene for tRNA.

Authors:  Z Schwarz; S O Jolly; A A Steinmetz; L Bogorad
Journal:  Proc Natl Acad Sci U S A       Date:  1981-06       Impact factor: 11.205

8.  Fractionation and identification of spinach chloroplast transfer RNAs and mapping of their genes on the restriction map of chloroplast DNA.

Authors:  A J Driesel; E J Crouse; K Gordon; H J Bohnert; R G Herrmann; A Steinmetz; M Mubumbila; M Keller; G Burkard; J H Weil
Journal:  Gene       Date:  1979-08       Impact factor: 3.688

9.  Nucleotide sequences of five maize chloroplast transfer RNA genes and their flanking regions.

Authors:  A A Steinmetz; E T Krebbers; Z Schwarz; E J Gubbins; L Bogorad
Journal:  J Biol Chem       Date:  1983-05-10       Impact factor: 5.157

10.  Nucleotide sequence of a 1.1 kb fragment of the pea chloroplast genome containing three tRNA genes, one of which is located within an open reading frame of 91 codons.

Authors:  O F Rasmussen; B M Stummann; K W Henningsen
Journal:  Nucleic Acids Res       Date:  1984-12-11       Impact factor: 16.971

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  14 in total

1.  Compilation of tRNA sequences and sequences of tRNA genes.

Authors:  M Sprinzl; N Dank; S Nock; A Schön
Journal:  Nucleic Acids Res       Date:  1991-04-25       Impact factor: 16.971

2.  Nucleotide sequences of transfer RNA genes in the Pisum sativum chloroplast DNA.

Authors:  D R Shapiro; K K Tewari
Journal:  Plant Mol Biol       Date:  1986-01       Impact factor: 4.076

3.  A model for the evolution of the Vicia faba chloroplast genome.

Authors:  K Ko; A G Orfanides; N A Straus
Journal:  Theor Appl Genet       Date:  1987-05       Impact factor: 5.699

4.  The site of deletion of the inverted repeat in pea chloroplast DNA contains duplicated gene fragments.

Authors:  K H Wolfe
Journal:  Curr Genet       Date:  1988       Impact factor: 3.886

5.  A three-step model for the rearrangement of the chloroplast trnK-psbA region of the gymnosperm Pinus contorta.

Authors:  J Lidholm; P Gustafsson
Journal:  Nucleic Acids Res       Date:  1991-06-11       Impact factor: 16.971

6.  In wheat ctDNA, segments of ribosomal protein genes are dispersed repeats, probably conserved by nonreciprocal recombination.

Authors:  C M Bowman; R F Barker; T A Dyer
Journal:  Curr Genet       Date:  1988-08       Impact factor: 3.886

7.  Organization and nucleotide sequence of the broad bean chloroplast genes trnL-UAG, ndhF and two unidentified open reading frames.

Authors:  F Herdenberger; J H Weil; A Steinmetz
Journal:  Curr Genet       Date:  1988-12       Impact factor: 3.886

8.  Common features of three inversions in wheat chloroplast DNA.

Authors:  C J Howe; R F Barker; C M Bowman; T A Dyer
Journal:  Curr Genet       Date:  1988-04       Impact factor: 3.886

9.  A mutation hotspot in the chloroplast genome of a conifer (Douglas-fir: Pseudotsuga) is caused by variability in the number of direct repeats derived from a partially duplicated tRNA gene.

Authors:  V D Hipkins; K A Marshall; D B Neale; W H Rottmann; S H Strauss
Journal:  Curr Genet       Date:  1995-05       Impact factor: 3.886

10.  Pea chloroplast tRNA(Lys) (UUU) gene: transcription and analysis of an intron-containing gene.

Authors:  S K Boyer; J E Mullet
Journal:  Photosynth Res       Date:  1988-07       Impact factor: 3.573

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