Literature DB >> 3839464

Stable secondary structures at the 3'-end of the genome of yellow fever virus (17 D vaccine strain).

T Grange, M Bouloy, M Girard.   

Abstract

The sequence of the 3'-terminal 565 nucleotides of yellow fever virus has been determined from a cloned cDNA. Several structures are detectable: three tandemly repeated sequences, a series of inverted repeats and a stable secondary structure involving the 3'-terminal 120 nucleotides.

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Year:  1985        PMID： 3839464     DOI： 10.1016/0014-5793(85)80895-4

Source DB:  PubMed          Journal:  FEBS Lett        ISSN： 0014-5793            Impact factor:   4.124


  19 in total

1.  Essential role of cyclization sequences in flavivirus RNA replication.

Authors:  A A Khromykh; H Meka; K J Guyatt; E G Westaway
Journal:  J Virol       Date:  2001-07       Impact factor: 5.103

2.  Derivation and characterization of a dengue type 1 host range-restricted mutant virus that is attenuated and highly immunogenic in monkeys.

Authors:  Lewis Markoff; Xiaou Pang; Huo-shu Houng Hs; Barry Falgout; Raymond Olsen; Estella Jones; Stephanie Polo
Journal:  J Virol       Date:  2002-04       Impact factor: 5.103

3.  Quantitative mass spectrometry of DENV-2 RNA-interacting proteins reveals that the DEAD-box RNA helicase DDX6 binds the DB1 and DB2 3' UTR structures.

Authors:  Alex Michael Ward; Katell Bidet; Ang Yinglin; Siok Ghee Ler; Kelly Hogue; Walter Blackstock; Jayantha Gunaratne; Mariano A Garcia-Blanco
Journal:  RNA Biol       Date:  2011-11-01       Impact factor: 4.652

4.  The topology of bulges in the long stem of the flavivirus 3' stem-loop is a major determinant of RNA replication competence.

Authors:  Li Yu; Lewis Markoff
Journal:  J Virol       Date:  2005-02       Impact factor: 5.103

5.  Presence of poly(A) in a flavivirus: significant differences between the 3' noncoding regions of the genomic RNAs of tick-borne encephalitis virus strains.

Authors:  C W Mandl; C Kunz; F X Heinz
Journal:  J Virol       Date:  1991-08       Impact factor: 5.103

6.  Specific requirements for elements of the 5' and 3' terminal regions in flavivirus RNA synthesis and viral replication.

Authors:  Li Yu; Masako Nomaguchi; R Padmanabhan; Lewis Markoff
Journal:  Virology       Date:  2008-01-29       Impact factor: 3.616

7.  Secondary structure of the 3' untranslated region of flaviviruses: similarities and differences.

Authors:  V Proutski; E A Gould; E C Holmes
Journal:  Nucleic Acids Res       Date:  1997-03-15       Impact factor: 16.971

8.  A complex RNA motif defined by three discontinuous 5-nucleotide-long strands is essential for Flavivirus RNA replication.

Authors:  Byung-Hak Song; Sang-Im Yun; Yu-Jeong Choi; Jeong-Min Kim; Chan-Hee Lee; Young-Min Lee
Journal:  RNA       Date:  2008-07-30       Impact factor: 4.942

9.  Predicted stem-loop structures and variation in nucleotide sequence of 3' noncoding regions among animal calicivirus genomes.

Authors:  B S Seal; J D Neill; J F Ridpath
Journal:  Virus Genes       Date:  1994-07       Impact factor: 2.332

10.  Identification of specific nucleotide sequences within the conserved 3'-SL in the dengue type 2 virus genome required for replication.

Authors:  L Zeng; B Falgout; L Markoff
Journal:  J Virol       Date:  1998-09       Impact factor: 5.103
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